Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Threonyl-tRNA synthetase, class IIa

Term: IPR002320  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2717 SustainPine v3.0 918
AutoFact: putative polygalacturonase PG1 [Oryza sativa Japonica Group] dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group] gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene5788 SustainPine v3.0 2740
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_66, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene12869 SustainPine v3.0 1139
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonyl-tRNA synthetase, putative 3.983e-08
C-terminus
sp_v3.0_unigene28046 SustainPine v3.0 573
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31882 SustainPine v3.0 544
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 1.317e-08
C-terminus
sp_v3.0_unigene41938 SustainPine v3.0 307
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60063 SustainPine v3.0 165
AutoFact: Threonyl-trna synthetase n=1 Tax=Thalassiosira pseudonana RepID=B8BYS4_THAPS 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61554 SustainPine v3.0 234
AutoFact: Glyco_hydro_28 domain containing protein 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 1.67e-12
Internal
sp_v3.0_unigene70989 SustainPine v3.0 341
AutoFact: threonyl-tRNA synthetase [Oryza sativa Japonica Group] 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene100146 SustainPine v3.0 971
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 2.409e-08
Complete
sp_v3.0_unigene132223 SustainPine v3.0 166
AutoFact: Unassigned protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene136298 SustainPine v3.0 249
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene144215 SustainPine v3.0 712
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 8.085e-09
Misassembled
sp_v3.0_unigene144902 SustainPine v3.0 294
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 7.91e-09
Putative C-terminus
sp_v3.0_unigene151331 SustainPine v3.0 389
AutoFact: Threonyl-tRNA synthetase n=1 Tax=Naegleria gruberi RepID=D2VFF9_NAEGR 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene154512 SustainPine v3.0 437
AutoFact: AGAP008929-PA n=1 Tax=Anopheles gambiae RepID=Q7PWK7_ANOGA 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 1.317e-08
C-terminus
sp_v3.0_unigene156498 SustainPine v3.0 418
AutoFact: PREDICTED: similar to threonyl-tRNA synthetase n=1 Tax=Nasonia vitripennis RepID=UPI00015B5CE3 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160171 SustainPine v3.0 330
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165942 SustainPine v3.0 450
AutoFact: threonine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_776995.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL22348.1| hypothetical protein CNBB5220 [Cryptococcus neoformans var. neoformans B- 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190258 SustainPine v3.0 432
AutoFact: Probable threonyl-tRNA synthetase 1, cytoplasmic n=1 Tax=Dictyostelium discoideum RepID=SYTC1_DICDI 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Threonine--tRNA ligase 1.317e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain