Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene133744 SustainPine v3.0 453
• AutoFact: leucine-rich repeat receptor-like kinase F21M12.36 [Arabidopsis thaliana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 7.549e-22
Internal
sp_v3.0_unigene134223 SustainPine v3.0 313
• AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] sp|Q9LVP0.1|Y5639_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At5g63930; Flags: Precursor dbj|BAA96896.1| receptor-like protein kinase [Arabidopsis th 1.0e-13
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 3.65e-08
Internal
sp_v3.0_unigene135990 SustainPine v3.0 298
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase receptor 8.815e-11
Internal
sp_v3.0_unigene137909 SustainPine v3.0 264
• AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6ZRZ9_SOYBN 1.0e-37
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 5.855e-24
Internal
sp_v3.0_unigene138451 SustainPine v3.0 522
• AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rhicadhesin receptor, putative 1.723e-15
Putative C-terminus
sp_v3.0_unigene140478 SustainPine v3.0 489
• AutoFact: Photosystem I reaction center subunit V, chloroplastic n=4 Tax=rosids RepID=PSAG_ARATH 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit V, chloroplastic 4.393e-12
Putative Complete
sp_v3.0_unigene140730 SustainPine v3.0 419
• AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycolate oxidase 0.0
Internal
sp_v3.0_unigene141529 SustainPine v3.0 303
• AutoFact: leucine-rich repeat-like protein [Arabidopsis thaliana] gb|AAG52300.1|AC011020_7 putative receptor protein kinase [Arabidopsis thaliana] gb|AAC18784.1| Similar to ERECTA receptor protein kinase gb|U47029 from A. thaliana [Arabidopsis thaliana] gb|ACN59266 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene142411 SustainPine v3.0 949
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine Rich Repeat, putative 6.697e-28
C-terminus
sp_v3.0_unigene142464 SustainPine v3.0 1091
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
N-terminus
sp_v3.0_unigene143106 SustainPine v3.0 406
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent CoA ligase, putative 3.657e-32
Internal
sp_v3.0_unigene143611 SustainPine v3.0 472
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Internal
sp_v3.0_unigene143832 SustainPine v3.0 945
• AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GQ39_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 4.243e-38
C-terminus
sp_v3.0_unigene144987 SustainPine v3.0 1453
• AutoFact: O-acetyltransferase-like protein [Arabidopsis thaliana] ref|NP_001031478.1| O-acetyltransferase-like protein [Arabidopsis thaliana] gb|AAU05470.1| At2g34410 [Arabidopsis thaliana] gb|AAV59284.1| At2g34410 [Arabidopsis thaliana] dbj|BAD94920.1| hypothetica 0.0
• FL-Next: tr=O-acetyltransferase family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
C-terminus
sp_v3.0_unigene148182 SustainPine v3.0 199
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 5.0e-18
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 4.394e-19
Internal
sp_v3.0_unigene148772 SustainPine v3.0 280
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Populus trichocarpa RepID=B9HAY0_POPTR 9.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene149028 SustainPine v3.0 203
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149538 SustainPine v3.0 100
• AutoFact: CLV1-like LRR receptor kinase n=1 Tax=Silene latifolia RepID=D3KTY9_SILLA 2.0e-08
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.123e-11
Internal
sp_v3.0_unigene149796 SustainPine v3.0 353
• AutoFact: DREB-like protein n=2 Tax=Arachis hypogaea RepID=B4UW60_ARAHY 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene149998 SustainPine v3.0 296
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 6.0e-20
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.502e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain