Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene118700 SustainPine v3.0 352
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118918 SustainPine v3.0 147
AutoFact: receptor-like protein kinase 1 [Glycine max] 9.0e-16
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase-like protein 5.783e-12
Internal
sp_v3.0_unigene119698 SustainPine v3.0 316
AutoFact: ATP binding protein, putative (EC:2.7.11.25) 2.0e-17
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.815e-10
Internal
sp_v3.0_unigene119915 SustainPine v3.0 408
AutoFact: putative protein kinase Xa21 [Oryza sativa Japonica Group] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein 8.114e-21
Internal
sp_v3.0_unigene120342 SustainPine v3.0 301
AutoFact: PsaG, PSI-G, subunit V, photosystem I polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RX32_OSTLU 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene120366 SustainPine v3.0 368
AutoFact: Putative leucine rich repeat transmembrane protein kinase n=1 Tax=Corchorus olitorius RepID=B6E503_9ROSI 8.0e-14
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 4.146e-09
Internal
sp_v3.0_unigene121009 SustainPine v3.0 258
AutoFact: pfam12799, LRR_4, Leucine Rich repeats (2 copies) 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_57, whole genome shotgun sequence 1.195e-07
Putative C-terminus
sp_v3.0_unigene121649 SustainPine v3.0 200
AutoFact: Meiotic checkpoint regulator cut4, putative n=1 Tax=Ricinus communis RepID=B9SQN9_RICCO 2.0e-11
FL-Next: sp=Anaphase-promoting complex subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121701 SustainPine v3.0 327
AutoFact: putative receptor-like protein kinase 1 [Oryza sativa Japonica Group] gb|ABF99107.1| Receptor protein kinase CLAVATA1 precursor, putative, expressed [Oryza sativa Japonica Group] 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 2.703e-09
Internal
sp_v3.0_unigene122891 SustainPine v3.0 406
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1270; Flags: Precursor dbj|BAB02023.1| un 2.94273e-44
FL-Next: sp=Pentatricopeptide repeat-containing protein At3g18110, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123445 SustainPine v3.0 531
AutoFact: putative LRR receptor-like kinase [Oryza sativa Japonica Group] dbj|BAH01336.1| unnamed protein product [Oryza sativa Japonica Group] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene123760 SustainPine v3.0 195
AutoFact: ABC transporter B family member 20 n=6 Tax=Arabidopsis RepID=AB20B_ARATH 2.0e-19
FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.384e-06
Internal
sp_v3.0_unigene125166 SustainPine v3.0 230
AutoFact: anaphase-promoting complex subunit 1 [Arabidopsis thaliana] sp|Q9FFF9.1|APC1_ARATH RecName: Full=Anaphase-promoting complex subunit 1; AltName: Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO DEFECTIVE 2771 dbj|BAB11545.1| meiotic check point regul 2.0e-05
FL-Next: sp=Anaphase-promoting complex subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene126081 SustainPine v3.0 808
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 5.086e-32
Internal
sp_v3.0_unigene126217 SustainPine v3.0 698
AutoFact: Auxin transporter-like protein 1 n=1 Tax=Medicago truncatula RepID=LAX1_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin influx carrier component 1.213e-29
Internal
sp_v3.0_unigene126218 SustainPine v3.0 330
AutoFact: Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica Group] 1.0e-20
FL-Next: sp=Alanine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alanine-trna ligase 8.35e-09
Putative N-terminus
sp_v3.0_unigene126608 SustainPine v3.0 786
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.485e-17
Complete
sp_v3.0_unigene126978 SustainPine v3.0 1108
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 1.898e-29
Complete
sp_v3.0_unigene127256 SustainPine v3.0 673
AutoFact: Peroxisomal (S)-2-hydroxy-acid oxidase n=1 Tax=Spinacia oleracea RepID=GOX_SPIOL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 2.568e-26
N-terminus
sp_v3.0_unigene127292 SustainPine v3.0 1472
AutoFact: Acyl:coa ligase n=1 Tax=Populus trichocarpa RepID=B9GMK1_POPTR 0.0
FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
Sma3: Acyl:coa ligase 1.707e-34
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain