Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene108143 SustainPine v3.0 261
AutoFact: anaphase-promoting complex subunit 1 [Arabidopsis thaliana] sp|Q9FFF9.1|APC1_ARATH RecName: Full=Anaphase-promoting complex subunit 1; AltName: Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO DEFECTIVE 2771 dbj|BAB11545.1| meiotic check point regul 3.0e-08
FL-Next: sp=Anaphase-promoting complex subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene108161 SustainPine v3.0 687
AutoFact: MDR-like ABC transporter [Oryza sativa Japonica Group] dbj|BAD87033.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] dbj|BAD87850.1| putative multidrug resistance protein 1 homolog [Oryza sativa Japonica Group] 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.669e-06
Internal
sp_v3.0_unigene108715 SustainPine v3.0 868
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 3.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 1.75e-17
N-terminus
sp_v3.0_unigene108718 SustainPine v3.0 348
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb02g006360; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene108732 SustainPine v3.0 322
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-31
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.386e-16
Internal
sp_v3.0_unigene109216 SustainPine v3.0 496
AutoFact: B0809H07.1 protein n=1 Tax=Oryza sativa RepID=Q01JX9_ORYSA 5.0e-34
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene109412 SustainPine v3.0 543
AutoFact: ABC transporter B family member 20 [Arabidopsis thaliana] sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC transporter B family member 20; Short=ABC transporter ABCB.20; Short=AtABCB20; AltName: Full=Multidrug resistance protein 14; AltName: Full=P-glycoprotein 1.0e-09
FL-Next: sp=ABC transporter B family member 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.506e-06
N-terminus
sp_v3.0_unigene110184 SustainPine v3.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene110276 SustainPine v3.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.345e-17
Internal
sp_v3.0_unigene110992 SustainPine v3.0 229
AutoFact: REF4-related 1 protein [Arabidopsis thaliana] dbj|BAB02777.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76780.1| REF4-related 1 protein [Arabidopsis thaliana] 3.0e-11
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111252 SustainPine v3.0 603
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 1.99965e-42
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: MDR-like ABC transporter 1.16728e-42
C-terminus
sp_v3.0_unigene111790 SustainPine v3.0 748
AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.357e-12
Putative Complete
sp_v3.0_unigene112466 SustainPine v3.0 456
AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 3.298e-09
Internal
sp_v3.0_unigene112663 SustainPine v3.0 485
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9T4J8_RICCO 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Internal
sp_v3.0_unigene114179 SustainPine v3.0 459
AutoFact: putative cucumisin-like serine protease [Oryza sativa Japonica Group] gb|AAP53584.1| Subtilisin N-terminal Region family protein, expressed [Oryza sativa Japonica Group] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 5.6e-18
Internal
sp_v3.0_unigene116357 SustainPine v3.0 747
AutoFact: Coiled-coil domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9ST48_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene116424 SustainPine v3.0 397
AutoFact: 48-kDa glycoprotein n=1 Tax=Corylus avellana RepID=Q8S4P9_CORAV 3.0e-34
FL-Next: tr=Vicilin-like storage protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: 48-kDa glycoprotein 6.056e-10
Internal
sp_v3.0_unigene116577 SustainPine v3.0 416
AutoFact: Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 n=7 Tax=Camelineae RepID=BAME2_ARATH 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.052e-24
Internal
sp_v3.0_unigene117705 SustainPine v3.0 240
AutoFact: Glucose-6-phosphate/phosphate translocator 2 n=2 Tax=Andropogoneae RepID=B6SRN7_MAIZE 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-6-phosphate/phosphate translocator 1.798e-11
Internal
sp_v3.0_unigene117973 SustainPine v3.0 329
AutoFact: OSJNBa0093O08.5 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XTP2_ORYSJ 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain