Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HTH domain AraC-type, conserved site

Term: IPR018062  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64611 SustainPine v3.0 220
AutoFact: Pentatricopeptide (PPR) repeat-containing protein-like protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6ZIP5_ORYSJ 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 5.085e-25
Internal
sp_v3.0_unigene64852 SustainPine v3.0 172
AutoFact: cysteine-rich receptor-like protein kinase 13 [Arabidopsis thaliana] sp|Q0PW40.1|CRK13_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 13; Short=Cysteine-rich RLK13; Flags: Precursor gb|ABG74916.1| cysteine-rich receptor-like kinase 13 [Ara 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative serine/threonine kinase protein 1.873e-14
Internal
sp_v3.0_unigene65149 SustainPine v3.0 190
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.825e-11
Putative N-terminus
sp_v3.0_unigene65459 SustainPine v3.0 216
AutoFact: Rab5/RabF-family small GTPase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9STK1_PHYPA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein RHN1 7.655e-14
Internal
sp_v3.0_unigene65744 SustainPine v3.0 164
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 9.0e-16
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 5.244e-26
Internal
sp_v3.0_unigene65766 SustainPine v3.0 235
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IJZ6_POPTR 1.0e-17
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 4.116e-21
Internal
sp_v3.0_unigene66285 SustainPine v3.0 332
AutoFact: CLAVATA1 receptor kinase( CLV1)-like protein [Oryza sativa Japonica Group] 2.0e-17
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 2.561e-14
Internal
sp_v3.0_unigene66537 SustainPine v3.0 372
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.299e-12
C-terminus
sp_v3.0_unigene67353 SustainPine v3.0 391
AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase receptor 1.106e-08
Internal
sp_v3.0_unigene67364 SustainPine v3.0 419
AutoFact: Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 5.349e-11
Putative N-terminus
sp_v3.0_unigene68288 SustainPine v3.0 263
AutoFact: Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.485e-14
Internal
sp_v3.0_unigene68452 SustainPine v3.0 300
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g14820, mitochondrial; Flags: Precursor emb|CAC01881.1| putative protein [Arabidopsis thaliana] gb|AED9 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene69908 SustainPine v3.0 421
AutoFact: putative permease [Solanum lycopersicum] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleobase ascorbate transporter 5.916e-11
Putative N-terminus
sp_v3.0_unigene70130 SustainPine v3.0 250
AutoFact: subtilisin-like serine protease [Arabidopsis thaliana] 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Internal
sp_v3.0_unigene70556 SustainPine v3.0 378
AutoFact: protein kinase [Oryza sativa] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 1.703e-12
Internal
sp_v3.0_unigene71601 SustainPine v3.0 293
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9R9V0_RICCO 2.0e-25
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 3.464e-27
Internal
sp_v3.0_unigene73673 SustainPine v3.0 471
AutoFact: Unassigned protein
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 33A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73725 SustainPine v3.0 363
AutoFact: Leucine-rich repeat transmembrane protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S154_RICCO 3.0e-17
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Leucine-rich repeat receptor protein kinase EXS, putative 7.917e-06
Internal
sp_v3.0_unigene73798 SustainPine v3.0 400
AutoFact: Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Alanine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alanyl-tRNA synthetase 1.126e-10
Internal
sp_v3.0_unigene73854 SustainPine v3.0 382
AutoFact: putative serine protease [Populus x canadensis] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain