Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 3'-5'-exoribonuclease activity

Term: GO:0000175  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1259 SustainPine v3.0 3377
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1914 SustainPine v3.0 2363
AutoFact: Ribonuclease II/R family protein [Arabidopsis thaliana] gb|AAQ62877.1| At5g02250 [Arabidopsis thaliana] dbj|BAD44146.1| ribonuclease II-like protein [Arabidopsis thaliana] gb|AED90450.1| Ribonuclease II/R family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Ribonuclease II-like protein 1.746e-09
C-terminus
sp_v3.0_unigene2855 SustainPine v3.0 312
AutoFact: Polyribonucleotide phophorylase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q41370_SPIOL 1.0e-31
FL-Next: tr=Polyribonucleotide nucleotidyltransferase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Polynucleotide phosphorylase 1.122e-08
Internal
sp_v3.0_unigene3193 SustainPine v3.0 1599
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exosome complex exonuclease RRP43 3.392e-09
Complete
sp_v3.0_unigene4644 SustainPine v3.0 429
AutoFact: Magnesium chelatase H subunit n=2 Tax=Rosaceae RepID=C1KIZ6_PRUPE 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.861e-09
Internal
sp_v3.0_unigene5392 SustainPine v3.0 1686
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene6329 SustainPine v3.0 1264
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 0.0
FL-Next: sp=Exosome complex exonuclease RRP46 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene7302 SustainPine v3.0 2289
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Nucleolar autoantigen-like protein 5.58e-09
Complete
sp_v3.0_unigene8064 SustainPine v3.0 1915
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Magnesium-chelatase subunit chlh-like protein chloroplast 6.584e-09
C-terminus
sp_v3.0_unigene13241 SustainPine v3.0 815
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exosome complex exonuclease RRP43 1.777e-09
C-terminus
sp_v3.0_unigene13580 SustainPine v3.0 602
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Sma3: Polynucleotide phosphorylase 5.675e-12
Internal
sp_v3.0_unigene13638 SustainPine v3.0 497
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.622e-09
Internal
sp_v3.0_unigene15106 SustainPine v3.0 606
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene28085 SustainPine v3.0 1442
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29621 SustainPine v3.0 1011
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.506e-09
N-terminus
sp_v3.0_unigene37500 SustainPine v3.0 884
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.335e-09
Internal
sp_v3.0_unigene44582 SustainPine v3.0 826
AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 0.0
FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
Sma3: Ribonuclease II-like protein 1.111e-09
N-terminus
sp_v3.0_unigene56602 SustainPine v3.0 453
AutoFact: CHLH1 like Mg protoporphyrin IX chelatase subunit H protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TWL7_PHYPA 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 6.042e-09
C-terminus
sp_v3.0_unigene59195 SustainPine v3.0 255
AutoFact: Polyribonucleotide nucleotidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SI65_RICCO 1.0e-17
FL-Next: tr=Polyribonucleotide nucleotidyltransferase, putative; Ricinus communis (Castor bean). 0.0
Sma3: Polynucleotide phosphorylase 2.613e-08
Internal
sp_v3.0_unigene62480 SustainPine v3.0 222
AutoFact: Magnesium chelatase H subunit n=2 Tax=Rosaceae RepID=C1KIZ6_PRUPE 7.0e-16
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 4.233e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain