Sustainpine_db
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Name: 3'-5'-exoribonuclease activity

Term: GO:0000175  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene62638 SustainPine v3.0 307
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 3.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene64396 SustainPine v3.0 128
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75805 SustainPine v3.0 354
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 4.0e-24
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Sma3: Polynucleotide phosphorylase 1.122e-08
Internal
sp_v3.0_unigene75827 SustainPine v3.0 209
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene77834 SustainPine v3.0 341
AutoFact: Exosome component 4 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NCK3_COPC7 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80317 SustainPine v3.0 205
AutoFact: polynucleotide phosphorylase [Pisum sativum] 1.0e-12
FL-Next: tr=Putative uncharacterized protein Sb02g003900; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Putative polynucleotide phosphorylase 1.439e-08
Internal
sp_v3.0_unigene93874 SustainPine v3.0 1162
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.335e-09
Internal
sp_v3.0_unigene94659 SustainPine v3.0 610
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Polyribonucleotide nucleotidyltransferase, putative 2.802e-08
Internal
sp_v3.0_unigene103907 SustainPine v3.0 514
AutoFact: ribonuclease II-like protein [Arabidopsis thaliana] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene103954 SustainPine v3.0 352
AutoFact: Polynucleotide phosphorylase n=2 Tax=Arabidopsis RepID=Q9S7G6_ARATH 4.0e-31
FL-Next: tr=Polynucleotide phosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110831 SustainPine v3.0 379
AutoFact: polyribonucleotide phophorylase [Spinacia oleracea] 1.0e-18
FL-Next: tr=Polyribonucleotide nucleotidyltransferase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Polynucleotide phosphorylase 1.657e-08
Putative N-terminus
sp_v3.0_unigene111128 SustainPine v3.0 182
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 1.0e-09
FL-Next: tr=Putative uncharacterized protein Sb04g026110; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene121666 SustainPine v3.0 421
AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 2.0e-33
FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
Sma3: Ribonuclease II-like protein 1.111e-09
Internal
sp_v3.0_unigene131471 SustainPine v3.0 390
AutoFact: Ribonuclease II/R family protein [Arabidopsis thaliana] gb|AAQ62877.1| At5g02250 [Arabidopsis thaliana] dbj|BAD44146.1| ribonuclease II-like protein [Arabidopsis thaliana] gb|AED90450.1| Ribonuclease II/R family protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Ribonuclease II-like protein 1.475e-09
Internal
sp_v3.0_unigene136495 SustainPine v3.0 222
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 3.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene136537 SustainPine v3.0 413
AutoFact: Mg protoporphyrin IX chelatase n=2 Tax=Nicotiana tabacum RepID=O22435_TOBAC 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.06e-09
Internal
sp_v3.0_unigene149466 SustainPine v3.0 183
AutoFact: Polyribonucleotide nucleotidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SFA0_RICCO 2.0e-23
FL-Next: tr=Polyribonucleotide nucleotidyltransferase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene156422 SustainPine v3.0 538
AutoFact: exosome component 4 [Xenopus laevis] gb|AAH87307.1| LOC495942 protein [Xenopus laevis] 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene160569 SustainPine v3.0 514
AutoFact: Mg-chelatase subunit XANTHA-F n=2 Tax=Hordeum vulgare RepID=Q94C01_HORVD 2.0e-10
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium chelatase subunit 1.119e-07
Internal
sp_v3.0_unigene194909 SustainPine v3.0 762
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 4.0e-12
FL-Next: sp=Exosome complex exonuclease RRP46 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain