Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10913 SustainPine v3.0 1305
• AutoFact: [I] COG0657 Esterase/lipase 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Hsr203J 5.105e-13
Complete
sp_v3.0_unigene11005 SustainPine v3.0 902
• AutoFact: Peptide transporter PTR2-B n=2 Tax=Zea mays RepID=B6SWT0_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 9.246e-29
C-terminus
sp_v3.0_unigene11187 SustainPine v3.0 2033
• AutoFact: UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp|Q9SJL0.1|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb|AAD31582.1| putative glucosyltransferase [Arabidopsis thaliana] gb|AAL06924.1| At2g36970/T1J8.15 [Arabidopsis thaliana] gb|AA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucose:glucosyltransferase 4.019e-07
Complete
sp_v3.0_unigene11411 SustainPine v3.0 910
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T6M4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptide transporter, putative 1.965e-27
C-terminus
sp_v3.0_unigene11423 SustainPine v3.0 1770
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 4.797e-13
C-terminus
sp_v3.0_unigene11432 SustainPine v3.0 792
• AutoFact: male sterility 2 (MS2) protein [Arabidopsis thaliana] prf||1916413A male sterility 2 gene 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Male sterility protein, putative 9.009e-16
Internal
sp_v3.0_unigene11504 SustainPine v3.0 682
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB10542.1| unnamed protein product [Arabidopsis thaliana] gb|AAK76728.1| unknown protein [Arabidopsis thaliana] gb|AAL85047.1| unknown protein [Arabidopsis thaliana] gb|AED96215.1| mate eff 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TRANSPARENT TESTA 12 protein, putative 3.99e-31
N-terminus
sp_v3.0_unigene11521 SustainPine v3.0 1373
• AutoFact: Expansin n=1 Tax=Vicia faba RepID=A2IBX3_VICFA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Complete
sp_v3.0_unigene11841 SustainPine v3.0 1448
• AutoFact: DUF659 domain containing protein 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene12366 SustainPine v3.0 1916
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Complete
sp_v3.0_unigene12450 SustainPine v3.0 587
• AutoFact: putative protein phosphatase 2C [Sorghum bicolor] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 2.785e-09
Putative C-terminus
sp_v3.0_unigene12574 SustainPine v3.0 2041
• AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 3.60134e-43
Complete
sp_v3.0_unigene12582 SustainPine v3.0 1131
• AutoFact: 4-coumarate--CoA ligase-like 5 n=3 Tax=Arabidopsis RepID=4CLL5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 6.218e-36
Internal
sp_v3.0_unigene12721 SustainPine v3.0 713
• AutoFact: RCC1 domain containing protein 3.0e-13
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene12869 SustainPine v3.0 1139
• AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Threonyl-tRNA synthetase, putative 3.983e-08
C-terminus
sp_v3.0_unigene12898 SustainPine v3.0 3657
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.935e-21
Complete
sp_v3.0_unigene12933 SustainPine v3.0 1319
• AutoFact: UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp|Q9SJL0.1|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb|AAD31582.1| putative glucosyltransferase [Arabidopsis thaliana] gb|AAL06924.1| At2g36970/T1J8.15 [Arabidopsis thaliana] gb|AA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative glucosyltransferase 4.869e-06
C-terminus
sp_v3.0_unigene12950 SustainPine v3.0 981
• AutoFact: cytokinin-regulated kinase 1 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase APK1A 3.156e-11
Putative C-terminus
sp_v3.0_unigene13094 SustainPine v3.0 2306
• AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 5.749e-36
Complete
sp_v3.0_unigene13184 SustainPine v3.0 976
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
• FL-Next: tr=Laccase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain