Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9153 SustainPine v3.0 1671
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 1.19e-38
C-terminus
sp_v3.0_unigene9154 SustainPine v3.0 721
AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 1.313e-14
N-terminus
sp_v3.0_unigene9183 SustainPine v3.0 1771
AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aux/IAA protein 1.658e-23
Complete
sp_v3.0_unigene9285 SustainPine v3.0 2030
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9346 SustainPine v3.0 1449
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene9461 SustainPine v3.0 1616
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene9494 SustainPine v3.0 645
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 2.0e-33
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 1.26117e-44
C-terminus
sp_v3.0_unigene9596 SustainPine v3.0 932
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At1g27060 6.823e-06
Putative C-terminus
sp_v3.0_unigene9682 SustainPine v3.0 1564
AutoFact: pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative glucosyltransferase 3.265e-08
Complete
sp_v3.0_unigene9687 SustainPine v3.0 1201
AutoFact: Alpha-expansin 13, putative n=1 Tax=Ricinus communis RepID=B9SKR9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene9825 SustainPine v3.0 1207
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 4.283e-38
C-terminus
sp_v3.0_unigene9936 SustainPine v3.0 1828
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 9.136e-18
Complete
sp_v3.0_unigene10024 SustainPine v3.0 1280
AutoFact: polygalacturonase [Arabidopsis thaliana] sp|Q949Z1.1|PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; AltName: Full=Pectinase At1g48100; Flags: Precursor gb|AAK92733.1| putative polygalacturonase PG1 [Arabidopsis thaliana] gb|AAM20001.1| p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene10065 SustainPine v3.0 1276
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9SCH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl:coa ligase 3.86e-38
C-terminus
sp_v3.0_unigene10258 SustainPine v3.0 1372
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.066e-20
C-terminus
sp_v3.0_unigene10317 SustainPine v3.0 1538
AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Somatic embryogenesis receptor kinase, putative 1.303e-09
Putative N-terminus
sp_v3.0_unigene10362 SustainPine v3.0 2273
AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
FL-Next: tr=Protein RCC2, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene10505 SustainPine v3.0 747
AutoFact: putative peptide/nitrate transporter [Arabidopsis thaliana] sp|Q9M1I2.1|PTR46_ARATH RecName: Full=Probable peptide/nitrate transporter At3g54450 emb|CAB77565.1| oligopeptide transporter-like protein [Arabidopsis thaliana] gb|AEE79233.1| putative peptide/n 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 2.7e-26
Internal
sp_v3.0_unigene10765 SustainPine v3.0 888
AutoFact: Sex determining protein n=3 Tax=Mus musculus musculus RepID=O35861_MOUSE 5.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 4.915e-17
Putative C-terminus
sp_v3.0_unigene10902 SustainPine v3.0 515
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI1_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain