Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3486 SustainPine v3.0 1915
AutoFact: Senescence/dehydration-associated protein-like protein [Arabidopsis thaliana] dbj|BAC42465.1| unknown protein [Arabidopsis thaliana] gb|AAO63399.1| At4g15450 [Arabidopsis thaliana] gb|AEE83605.1| Senescence/dehydration-associated protein-like protein [Ara 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3550 SustainPine v3.0 2665
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001190017.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] emb|CAB82809.1| kinesin-related protein-like [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin, motor region 1.874e-11
Putative Complete
sp_v3.0_unigene3599 SustainPine v3.0 778
AutoFact: ARO1-like protein (Fragment) n=1 Tax=Pinus taeda RepID=B7FF15_PINTA 3.0e-25
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: ARO1-like protein 1 3.56e-17
C-terminus
sp_v3.0_unigene3641 SustainPine v3.0 4734
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SN51_RICCO 0.0
FL-Next: Isoform 2 of Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana GN=PERK1 0.0
Sma3: ATP binding protein, putative 4.326e-13
Complete
sp_v3.0_unigene3701 SustainPine v3.0 2860
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3752 SustainPine v3.0 2065
AutoFact: protein limit dextrinase [Arabidopsis thaliana] sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gb|AED90732.1| protein limit dextrinase [Arabidopsis tha 0.0
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pullulanase-type starch debranching enzyme 1.826e-12
C-terminus
sp_v3.0_unigene3830 SustainPine v3.0 2713
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene3888 SustainPine v3.0 1636
AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein At4g17050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3921 SustainPine v3.0 2974
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB87674.1| putative protein [Arabidopsis thaliana] gb|AAL24182.1| AT5g12010/F14F18_180 [Arabidopsis thaliana] gb|AAN73294.1| At5g12010/F14F18_180 [Arabidopsis thaliana] gb|AED91750.1| uncharacterized pro 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene4026 SustainPine v3.0 2531
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SF10_RICCO 0.0
FL-Next: sp=F-box/LRR-repeat protein 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene4168 SustainPine v3.0 1519
AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 6.166e-22
C-terminus
sp_v3.0_unigene4231 SustainPine v3.0 680
AutoFact: secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Secondary cell wall-related glycosyltransferase family 47, putative, expressed 2.373e-08
Internal
sp_v3.0_unigene4326 SustainPine v3.0 822
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 2.0e-11
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Putative transcriptional activator DEMETER 4.891e-09
Internal
sp_v3.0_unigene4337 SustainPine v3.0 1194
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Complete
sp_v3.0_unigene4480 SustainPine v3.0 484
AutoFact: Expansin-3 n=1 Tax=Petunia x hybrida RepID=Q6RX67_PETHY 3.0e-25
FL-Next: tr=Expansin 1; Cunninghamia lanceolata (China fir). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene4494 SustainPine v3.0 953
AutoFact: putative nitrite transporter [Arabidopsis thaliana] sp|Q9SX20.1|PTR18_ARATH RecName: Full=Probable nitrite transporter At1g68570 gb|AAD49986.1|AC008075_19 Similar to gb|AF023472 peptide transporter from Hordeum vulgare and is a member of the PF|00854 Pept 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nitrate transporter, putative 1.479e-27
C-terminus
sp_v3.0_unigene4506 SustainPine v3.0 662
AutoFact: CCT domain containing protein 2.0e-19
FL-Next: tr=Zinc finger protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Constans-like protein 2.493e-21
C-terminus
sp_v3.0_unigene4573 SustainPine v3.0 1545
AutoFact: polygalacturonase [Persea americana] 0.0
FL-Next: sp=Polygalacturonase; Persea americana (Avocado). 0.0
Sma3: Polygalacturonase 0.0
Complete
sp_v3.0_unigene4657 SustainPine v3.0 1203
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin ligase PUB14, putative 7.602e-12
C-terminus
sp_v3.0_unigene4722 SustainPine v3.0 675
AutoFact: Ran GTPase binding protein, putative n=3 Tax=rosids RepID=B9SM24_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 5.724e-22
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain