Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99047 SustainPine v3.0 383
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 3.0e-24
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene99124 SustainPine v3.0 280
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 2.361e-35
Internal
sp_v3.0_unigene99190 SustainPine v3.0 688
• AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9RGA9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr18 scaffold_122, whole genome shotgun sequence 8.783e-15
Internal
sp_v3.0_unigene99464 SustainPine v3.0 881
• AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.945e-11
N-terminus
sp_v3.0_unigene99465 SustainPine v3.0 903
• AutoFact: DUF506 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uncharacterized plant-specific domain TIGR01615 family protein, expressed 2.578e-08
Internal
sp_v3.0_unigene99563 SustainPine v3.0 655
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene99868 SustainPine v3.0 859
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene99934 SustainPine v3.0 390
• AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein kinase APK1B, chloroplast, putative 3.381e-08
Internal
sp_v3.0_unigene100006 SustainPine v3.0 469
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene100128 SustainPine v3.0 638
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 4.5374e-42
C-terminus
sp_v3.0_unigene100706 SustainPine v3.0 336
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene100720 SustainPine v3.0 651
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
N-terminus
sp_v3.0_unigene101189 SustainPine v3.0 487
• AutoFact: Splicing factor-like protein n=7 Tax=Embryophyta RepID=Q9T0I6_ARATH 0.0
• FL-Next: tr=Splicing factor-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative splicing factor Prp8 3.392e-09
Internal
sp_v3.0_unigene101588 SustainPine v3.0 399
• AutoFact: DUF506 domain containing protein 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101818 SustainPine v3.0 567
• AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WRKY transcription factor, putative 9.63e-20
C-terminus
sp_v3.0_unigene102261 SustainPine v3.0 1077
• AutoFact: FOG: RCC1 domain (ISS) [Ostreococcus tauri] emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene102324 SustainPine v3.0 577
• AutoFact: RCC1 domain containing protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102339 SustainPine v3.0 319
• AutoFact: SHR5-receptor-like kinase [Saccharum hybrid cultivar SP70-1143] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 3.414e-13
Internal
sp_v3.0_unigene102392 SustainPine v3.0 1447
• AutoFact: pfam07002, Copine, Copine 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 1.09e-20
N-terminus
sp_v3.0_unigene102598 SustainPine v3.0 1307
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain