Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Mitochodrial transcription termination factor-related

Term: IPR003690  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24428 SustainPine v3.0 4281
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene27551 SustainPine v3.0 1128
AutoFact: nuclear transcription factor Y subunit B-2 [Arabidopsis thaliana] sp|Q9FGJ3.1|NFYB2_ARATH RecName: Full=Nuclear transcription factor Y subunit B-2; Short=AtNF-YB-2; AltName: Full=Transcriptional activator HAP3B gb|AAK60334.1|AF385744_1 AT5g47640/MNJ7_23 [ 7.00005e-41
FL-Next: sp=Nuclear transcription factor Y subunit B-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ccaat-binding transcription factor subunit A, putative 4.01899e-40
Complete
sp_v3.0_unigene27633 SustainPine v3.0 879
AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
FL-Next: tr=CCAAT-box binding factor HAP3-like protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Ccaat-binding transcription factor subunit A, putative 6.658e-36
Complete
sp_v3.0_unigene27925 SustainPine v3.0 625
AutoFact: Unassigned protein 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28913 SustainPine v3.0 1272
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene30871 SustainPine v3.0 882
AutoFact: mTERF domain containing protein 9.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31186 SustainPine v3.0 1048
AutoFact: DUF810 domain containing protein 2.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene31727 SustainPine v3.0 950
AutoFact: Mitochondrial transcription termination factor-like n=1 Tax=Oryza sativa Japonica Group RepID=Q67UH1_ORYSJ 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene32776 SustainPine v3.0 721
AutoFact: mTERF domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene32788 SustainPine v3.0 1342
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene34549 SustainPine v3.0 2929
AutoFact: cold-induced thioredoxin domain-containing protein [Ammopiptanthus mongolicus] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene34557 SustainPine v3.0 371
AutoFact: Unassigned protein 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene34746 SustainPine v3.0 878
AutoFact: Mitochondrial transcription termination factor-like n=2 Tax=Oryza sativa RepID=Q67UH3_ORYSJ 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene35018 SustainPine v3.0 744
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene36193 SustainPine v3.0 759
AutoFact: Unassigned protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene36843 SustainPine v3.0 1469
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene37422 SustainPine v3.0 3168
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene37560 SustainPine v3.0 2009
AutoFact: DUF810 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene40682 SustainPine v3.0 1533
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene40815 SustainPine v3.0 730
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain