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Name: tryptophan biosynthetic process

Term: GO:0000162  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37772 SustainPine v3.0 1836
AutoFact: Putative chorismate mutase n=1 Tax=Fagus sylvatica RepID=Q30CZ6_FAGSY 0.0
FL-Next: sp=Chorismate mutase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chorismate mutase 1.4013e-45
Complete
sp_v3.0_unigene37813 SustainPine v3.0 1995
AutoFact: Chorismate mutase 1 n=1 Tax=Hordeum vulgare subsp. vulgare RepID=B5AAU1_HORVD 0.0
FL-Next: sp=Chorismate mutase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chorismate mutase 1.4013e-45
Complete
sp_v3.0_unigene47882 SustainPine v3.0 1544
AutoFact: R2R3-MYB transcription factor MYB11 n=1 Tax=Picea glauca RepID=A5JYF5_PICGL 0.0
FL-Next: Isoform 2 of Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 0.0
Sma3: Typical P-type R2R3 Myb protein 1.014e-26
Complete
sp_v3.0_unigene49422 SustainPine v3.0 259
AutoFact: Anthranilate synthase alpha 1 n=1 Tax=Camptotheca acuminata RepID=Q5XLF3_CAMAC 2.0e-25
FL-Next: sp=Anthranilate synthase component I-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Anthranilate synthase alpha subunit 8.972e-16
Internal
sp_v3.0_unigene49857 SustainPine v3.0 251
AutoFact: R2R3-MYB transcription factor MYB10 n=1 Tax=Picea glauca RepID=A5JYF4_PICGL 8.0e-33
FL-Next: tr=R2R3-MYB transcription factor MYB10; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: R2r3-myb transcription factor, putative 1.113e-13
Putative N-terminus
sp_v3.0_unigene54046 SustainPine v3.0 302
AutoFact: MYB transcription factor [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 2.412e-29
N-terminus
sp_v3.0_unigene57603 SustainPine v3.0 471
AutoFact: TRP_NEUCR Tryptophan synthase [Gibberella zeae PH-1] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase beta subunit 3.032e-12
Internal
sp_v3.0_unigene62799 SustainPine v3.0 225
AutoFact: MYB-like protein (Fragment) n=4 Tax=rosids RepID=Q2MV91_VITVI 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R2r3-myb transcription factor, putative 1.619e-14
Putative N-terminus
sp_v3.0_unigene65577 SustainPine v3.0 198
AutoFact: Chorismate mutase 02 n=1 Tax=Vitis vinifera RepID=D0VBC0_VITVI 4.0e-12
FL-Next: sp=Chorismate mutase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chorismate mutase 3.498e-11
Internal
sp_v3.0_unigene71335 SustainPine v3.0 360
AutoFact: indole-3-glycerol phosphate lyase [Hordeum lechleri] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase alpha subunit 1.64e-27
C-terminus
sp_v3.0_unigene95458 SustainPine v3.0 1036
AutoFact: R2R3-MYB transcription factor MYB22 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 6.925e-30
Putative Complete
sp_v3.0_unigene95922 SustainPine v3.0 598
AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 2.0e-11
FL-Next: sp=Anthranilate synthase component I-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Anthranilate synthase alpha subunit 2.723e-12
Putative N-terminus
sp_v3.0_unigene104701 SustainPine v3.0 539
AutoFact: transcription factor DcMYB2 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 8.725e-32
N-terminus
sp_v3.0_unigene123435 SustainPine v3.0 537
AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 1.0e-18
FL-Next: sp=Anthranilate synthase component I-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Anthranilate synthase alpha subunit 1.336e-11
N-terminus
sp_v3.0_unigene128931 SustainPine v3.0 290
AutoFact: RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags: Precursor gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata] gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase beta subunit 1.58e-12
C-terminus
sp_v3.0_unigene129979 SustainPine v3.0 356
AutoFact: R2R3 Myb4a C2 repressor motif protein n=1 Tax=Vitis vinifera RepID=A1E8L7_VITVI 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB10; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 1.781e-24
Internal
sp_v3.0_unigene133330 SustainPine v3.0 191
AutoFact: Tryptophan synthase beta chain 2 n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXA8_9GAMM 5.0e-19
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene141559 SustainPine v3.0 348
AutoFact: CTP_transf_1 domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene156093 SustainPine v3.0 188
AutoFact: Tryptophan synthase beta chain n=12 Tax=Pseudomonas RepID=TRPB_PSEPF 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase beta chain 2, chloroplastic 1.408e-12
Internal
sp_v3.0_unigene164328 SustainPine v3.0 405
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.13e-16
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain