Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76539 SustainPine v3.0 231
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Importin beta-3, putative 6.096e-09
Internal
sp_v3.0_unigene78434 SustainPine v3.0 172
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9RZX7_RICCO 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene78635 SustainPine v3.0 300
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78753 SustainPine v3.0 134
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene79518 SustainPine v3.0 317
AutoFact: putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] dbj|BAD30239.1| putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Importin beta-3, putative 1.168e-09
Internal
sp_v3.0_unigene80962 SustainPine v3.0 319
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 6.0e-14
FL-Next: sp=Importin subunit alpha; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Importin alpha, putative 1.347e-07
Internal
sp_v3.0_unigene81306 SustainPine v3.0 196
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene93545 SustainPine v3.0 1480
AutoFact: exportin 1A [Arabidopsis thaliana] emb|CAB56597.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAB89280.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] emb|CAC01715.1| Exportin1 (XPO1) protein [Arabidopsis thaliana] gb|AAL07205.1| putative expo 0.0
FL-Next: tr=Chromosome region maintenance protein 1/exportin, putative; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene94703 SustainPine v3.0 240
AutoFact: importin alpha 2 [Capsicum annuum] 2.0e-13
FL-Next: sp=Importin subunit alpha-1b; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Importin alpha-like protein 9.243e-15
N-terminus
sp_v3.0_unigene95016 SustainPine v3.0 419
AutoFact: putative nucleoporin PRECOZ [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Os03g0172000 protein 6.823e-06
Internal
sp_v3.0_unigene95099 SustainPine v3.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene97417 SustainPine v3.0 1210
AutoFact: kinesin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin, putative 1.017e-15
Complete
sp_v3.0_unigene98655 SustainPine v3.0 603
AutoFact: HASTY [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene98992 SustainPine v3.0 451
AutoFact: putative kinesin [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 3.585e-17
Internal
sp_v3.0_unigene99058 SustainPine v3.0 492
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 4.145e-13
Internal
sp_v3.0_unigene99618 SustainPine v3.0 644
AutoFact: HASTY [Arabidopsis thaliana] 2.0e-34
FL-Next: sp=Protein HASTY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At3g05040 6.546e-10
C-terminus
sp_v3.0_unigene99837 SustainPine v3.0 1187
AutoFact: Putative glucosyltransferase n=1 Tax=Phaseolus lunatus RepID=Q8S3B5_PHALU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 1.474e-13
C-terminus
sp_v3.0_unigene100094 SustainPine v3.0 616
AutoFact: Armadillo/beta-catenin-like repeat-containing protein n=2 Tax=Arabidopsis RepID=F4IYK6_ARATH 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene100274 SustainPine v3.0 995
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 4.565e-13
N-terminus
sp_v3.0_unigene100660 SustainPine v3.0 364
AutoFact: putative importin-alpha re-exporter [Oryza sativa Japonica Group] 1.0e-26
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain