Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15434 SustainPine v3.0 551
• AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 7.0e-19
• FL-Next: tr=Putative importin 9; Oryza granulata. 0.0
N-terminus
sp_v3.0_unigene21111 SustainPine v3.0 611
• AutoFact: kinesin 5 [Arabidopsis thaliana] gb|AEE82489.1| kinesin 5 [Arabidopsis thaliana] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin-like protein 2.213e-22
Complete
sp_v3.0_unigene21773 SustainPine v3.0 1453
• AutoFact: YABBY domain containing protein 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Axial regulator YABBY2 2.626e-15
Putative Complete
sp_v3.0_unigene21800 SustainPine v3.0 617
• AutoFact: Putative glucosyltransferase n=1 Tax=Phaseolus lunatus RepID=Q8S3B6_PHALU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 1.476e-35
Internal
sp_v3.0_unigene21963 SustainPine v3.0 595
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene22856 SustainPine v3.0 1625
• AutoFact: suppressor of auxin resistance 3 [Arabidopsis thaliana] gb|AAN03676.1|AF411839_1 putative nucleoporin PRECOZ [Arabidopsis thaliana] gb|AAX44044.1| putative nucleoporin 96 [Arabidopsis thaliana] gb|AEE36436.1| suppressor of auxin resistance 3 [Arabidopsis 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Nucleoporin autopeptidase family protein, expressed 3.335e-09
Putative N-terminus
sp_v3.0_unigene25935 SustainPine v3.0 472
• AutoFact: Ran binding protein 1 domain-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3B1Q8_POLPA 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran-binding protein 1 5.018e-17
Putative Complete
sp_v3.0_unigene28684 SustainPine v3.0 1120
• AutoFact: Unassigned protein
• FL-Next: tr=Exportin-7, putative; Ricinus communis (Castor bean). 0.0
Putative C-terminus
sp_v3.0_unigene28931 SustainPine v3.0 1389
• AutoFact: pfam07817, GLE1, GLE1-like protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene29764 SustainPine v3.0 592
• AutoFact: Ran binding protein [Nicotiana benthamiana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ran-binding protein 1 6.455e-21
Putative N-terminus
sp_v3.0_unigene30576 SustainPine v3.0 2845
• AutoFact: importin alpha 2 [Capsicum annuum] 0.0
• FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome chr5 scaffold_64, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene31899 SustainPine v3.0 1233
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene32090 SustainPine v3.0 633
• AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 2.0e-17
• FL-Next: tr=Importin-7, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene33049 SustainPine v3.0 854
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.447e-16
C-terminus
sp_v3.0_unigene33340 SustainPine v3.0 3881
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34302 SustainPine v3.0 738
• AutoFact: RecName: Full=Zeatin O-glucosyltransferase; AltName: Full=Trans-zeatin O-beta-D-glucosyltransferase gb|AAD04166.1| zeatin O-glucosyltransferase [Phaseolus lunatus] 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 1.46856e-42
C-terminus
sp_v3.0_unigene35307 SustainPine v3.0 308
• AutoFact: Nucleoporin GLE1, putative n=1 Tax=Ricinus communis RepID=B9RMT7_RICCO 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene36978 SustainPine v3.0 550
• AutoFact: Os05g0521300 protein n=4 Tax=Oryza sativa RepID=Q0DGN5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin heavy chain, putative 2.706e-15
Internal
sp_v3.0_unigene37033 SustainPine v3.0 649
• AutoFact: Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] gb|AAG51794.1|AC067754_10 kinesin, putative; 56847-62063 [Arabidopsis thaliana] gb|AEE35293.1| Di-glucose binding protein with Kinesin motor domain [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin heavy chain, putative 3.416e-15
Internal
sp_v3.0_unigene37129 SustainPine v3.0 3128
• AutoFact: Xpo1 domain containing protein 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain