Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6488 SustainPine v3.0 3647
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene6492 SustainPine v3.0 1608
AutoFact: Kinesin-related protein n=1 Tax=Gossypium hirsutum RepID=A4GU96_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 1.258e-17
Putative C-terminus
sp_v3.0_unigene6580 SustainPine v3.0 1821
AutoFact: C2 domain containing protein 6.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene6789 SustainPine v3.0 1850
AutoFact: C2 domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene8149 SustainPine v3.0 2532
AutoFact: importin alpha 2 [Capsicum annuum] 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr5 scaffold_64, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene8756 SustainPine v3.0 1770
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene8934 SustainPine v3.0 1944
AutoFact: putative importin-alpha re-exporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene9807 SustainPine v3.0 1861
AutoFact: PREDICTED: similar to protein transporter n=1 Tax=Vitis vinifera RepID=UPI000198299D 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene9996 SustainPine v3.0 2280
AutoFact: Importin subunit alpha-1 [Arabidopsis thaliana] ref|NP_850524.1| Importin subunit alpha-1 [Arabidopsis thaliana] sp|Q96321.2|IMA1_ARATH RecName: Full=Importin subunit alpha-1; AltName: Full=Karyopherin subunit alpha-1; Short=KAP-alpha-1 gb|AAC27644.1| imp 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Importin alpha, putative 5.68e-22
Complete
sp_v3.0_unigene10058 SustainPine v3.0 824
AutoFact: Nucleoporin GLE1, putative n=1 Tax=Ricinus communis RepID=B9RMT7_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Nucleoporin GLE1, putative 8.772e-06
Putative N-terminus
sp_v3.0_unigene10481 SustainPine v3.0 3864
AutoFact: IBN_N domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative transportin 8.893e-09
Complete
sp_v3.0_unigene10517 SustainPine v3.0 980
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene12295 SustainPine v3.0 955
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 4.227e-13
N-terminus
sp_v3.0_unigene12400 SustainPine v3.0 3767
AutoFact: Nucleoporin 98 n=1 Tax=Daucus carota RepID=A9ZP15_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13111 SustainPine v3.0 455
AutoFact: Importin beta-3, putative n=1 Tax=Ricinus communis RepID=B9T1E9_RICCO 0.0
FL-Next: tr=Importin beta-3, putative; Ricinus communis (Castor bean). 0.0
Sma3: Importin beta-3, putative 1.327e-08
Internal
sp_v3.0_unigene13128 SustainPine v3.0 1534
AutoFact: putative glucosyltransferase [Phaseolus lunatus] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 4.63e-28
C-terminus
sp_v3.0_unigene13724 SustainPine v3.0 1192
AutoFact: putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] dbj|BAD30239.1| putative karyopherin-beta 3 variant [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-3, putative 2.427e-13
Putative N-terminus
sp_v3.0_unigene14220 SustainPine v3.0 903
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14475 SustainPine v3.0 7876
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: YUP8H12R.9 8.772e-06
Complete
sp_v3.0_unigene14931 SustainPine v3.0 453
AutoFact: F10B6.25 n=2 Tax=Arabidopsis thaliana RepID=Q9LQU6_ARATH 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain