Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7325 SustainPine v3.0 2589
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400 gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana] gb|AEE34095.1| pentatricopeptide repea 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene7343 SustainPine v3.0 1641
AutoFact: Unassigned protein
FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene7374 SustainPine v3.0 2555
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.311e-24
Putative Complete
sp_v3.0_unigene7635 SustainPine v3.0 1460
AutoFact: No apical meristem-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZFA1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: NAC domain protein, IPR003441 5.192e-19
Complete
sp_v3.0_unigene7740 SustainPine v3.0 1359
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene7823 SustainPine v3.0 2688
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 homolog 2.783e-09
Complete
sp_v3.0_unigene8102 SustainPine v3.0 1757
AutoFact: cytochrome P450, family 94, subfamily B, polypeptide 1 [Arabidopsis thaliana] dbj|BAB08810.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|ABA61323.1| cytochrome P450 CYP94B1 [Arabidopsis thaliana] gb|AED97750.1| cytochrome P450, family 94, subf 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 8.616e-26
Complete
sp_v3.0_unigene8126 SustainPine v3.0 1050
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
FL-Next: sp=Bidirectional sugar transporter SWEET1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Seven-transmembrane-domain protein 1 3.442e-17
Complete
sp_v3.0_unigene8221 SustainPine v3.0 1296
AutoFact: nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q9LUR4.1|SWT16_ARATH RecName: Full=Bidirectional sugar transporter SWEET16; Short=AtSWEET16 dbj|BAB02761.1| cytochrome c oxidoreductase-like [Arabidopsis thaliana] gb|AAQ65151.1| At3g16690 [Arabidopsis t 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidoreductase 1.199e-12
Complete
sp_v3.0_unigene8226 SustainPine v3.0 4179
AutoFact: phosphatidylinositol 4-kinase alpha [Arabidopsis thaliana] ref|NP_850960.1| phosphatidylinositol 4-kinase alpha [Arabidopsis thaliana] sp|Q9SXA1.2|P4KA1_ARATH RecName: Full=Phosphatidylinositol 4-kinase alpha; Short=PI4-kinase alpha; Short=PtdIns-4-kinase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidylinositol 4-kinase 1.15e-17
Complete
sp_v3.0_unigene8268 SustainPine v3.0 912
AutoFact: putative cytochrome P450 protein [Oryza sativa Japonica Group] gb|AAP54351.1| Cytochrome P450 family protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 1.798e-30
C-terminus
sp_v3.0_unigene8406 SustainPine v3.0 2189
AutoFact: PLAC8 family protein n=2 Tax=Arabidopsis RepID=Q5XV52_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8468 SustainPine v3.0 1103
AutoFact: putative zinc dependent protease [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.981e-13
Internal
sp_v3.0_unigene8505 SustainPine v3.0 3027
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Poly(RC)-binding protein, putative 2.287e-07
Complete
sp_v3.0_unigene8595 SustainPine v3.0 1893
AutoFact: Pentatricopeptide repeat [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene8965 SustainPine v3.0 3040
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene8995 SustainPine v3.0 705
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900 gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: cDNA clone:J013162P09, full insert sequence 5.361e-06
Internal
sp_v3.0_unigene9069 SustainPine v3.0 2172
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.289e-16
Complete
sp_v3.0_unigene9125 SustainPine v3.0 1521
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] ref|NP_001031806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SZL5.1|PP356_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38150 emb|CAB37 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9139 SustainPine v3.0 1171
AutoFact: Cytochrome P450 n=1 Tax=Petunia x hybrida RepID=Q9MBF5_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain