Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5576 SustainPine v3.0 2121
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g60770; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.217e-08
Complete
sp_v3.0_unigene5620 SustainPine v3.0 2863
AutoFact: E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] sp|Q4FE45.1|XB33_ARATH RecName: Full=E3 ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT33; AltName: Full=Protein XB3 homolog 3 gb|AAZ140 0.0
FL-Next: sp=E3 ubiquitin-protein ligase XBAT33; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pollen ankyrin-like protein 1.048e-07
Complete
sp_v3.0_unigene5637 SustainPine v3.0 2926
AutoFact: ankyrin repeat-rich protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollen ankyrin-like protein 1.042e-07
Complete
sp_v3.0_unigene5645 SustainPine v3.0 2645
AutoFact: CRK1 protein n=1 Tax=Beta vulgaris subsp. vulgaris RepID=Q9LDC1_BETVU 0.0
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: CDKC 3.81e-12
Complete
sp_v3.0_unigene5672 SustainPine v3.0 1379
AutoFact: 50S ribosomal protein L7/L12, putative n=1 Tax=Ricinus communis RepID=B9RB19_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L7/L12, putative 4.351e-12
Complete
sp_v3.0_unigene5681 SustainPine v3.0 2144
AutoFact: Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 n=1 Tax=Populus trichocarpa RepID=MTBC_POPTR 0.0
FL-Next: sp=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene5756 SustainPine v3.0 2592
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: FAS2 3.801e-09
Complete
sp_v3.0_unigene5764 SustainPine v3.0 1597
AutoFact: APO protein 2 [Arabidopsis thaliana] gb|AED96973.1| APO protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 3.983e-09
C-terminus
sp_v3.0_unigene5819 SustainPine v3.0 3219
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AMP deaminase, putative 8.985e-09
Complete
sp_v3.0_unigene5909 SustainPine v3.0 1235
AutoFact: DsRNA-binding protein LH1 n=11 Tax=Brassica RepID=Q5IZK8_BRAOC 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Gb|AAD20688.1 3.449e-09
Complete
sp_v3.0_unigene5976 SustainPine v3.0 1780
AutoFact: Diacylglycerol kinase, alpha, putative n=1 Tax=Ricinus communis RepID=B9T0H8_RICCO 0.0
FL-Next: tr=Diacylglycerol kinase, alpha, putative; Ricinus communis (Castor bean). 0.0
Sma3: Diacylglycerol kinase 9.879e-11
Complete
sp_v3.0_unigene5992 SustainPine v3.0 2190
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein 1.053e-09
Complete
sp_v3.0_unigene6012 SustainPine v3.0 2848
AutoFact: DNA-damage-inducible protein f, putative n=1 Tax=Ricinus communis RepID=B9SIJ1_RICCO 0.0
FL-Next: sp=MATE efflux family protein 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-damage-inducible protein f, putative 6.379e-25
Complete
sp_v3.0_unigene6063 SustainPine v3.0 2302
AutoFact: diacylglycerol kinase 3 [Arabidopsis thaliana] gb|AAL57635.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AAM98254.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AEC06799.1| diacylglycerol kinase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Diacylglycerol kinase 1.03e-10
Complete
sp_v3.0_unigene6110 SustainPine v3.0 3141
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6131 SustainPine v3.0 2005
AutoFact: magnesium/proton exchanger [Arabidopsis thaliana] gb|AAF14229.1|AF109178_1 magnesium/proton exchanger AtMHX [Arabidopsis thaliana] gb|AAF14230.1|AF109182_1 magnesium/proton exchanger AtMHX [Arabidopsis thaliana] gb|AAC62871.2| putative Na+/Ca2+ antiporter 0.0
FL-Next: Isoform 2 of Magnesium/proton exchanger 1 OS=Oryza sativa subsp. japonica GN=MHX1 0.0
Complete
sp_v3.0_unigene6206 SustainPine v3.0 2176
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 6.946e-06
Complete
sp_v3.0_unigene6226 SustainPine v3.0 1693
AutoFact: BHLH transcription factor n=1 Tax=Zea mays RepID=B6UBF8_MAIZE 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.789e-17
Putative Complete
sp_v3.0_unigene6279 SustainPine v3.0 1245
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana GN=At4g18975 0.0
Putative Complete
sp_v3.0_unigene6306 SustainPine v3.0 4903
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 3.622e-09
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain