Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2717 SustainPine v3.0 918
AutoFact: putative polygalacturonase PG1 [Oryza sativa Japonica Group] dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group] gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase 0.0
Putative C-terminus
sp_v3.0_unigene2724 SustainPine v3.0 843
AutoFact: Quinone oxidoreductase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LDI4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alcohol dehydrogenase, putative 1.477e-25
C-terminus
sp_v3.0_unigene2794 SustainPine v3.0 2788
AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2810 SustainPine v3.0 3110
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2882 SustainPine v3.0 2373
AutoFact: DNA-binding protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2918 SustainPine v3.0 550
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.156e-11
C-terminus
sp_v3.0_unigene2960 SustainPine v3.0 1499
AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 3.983e-09
Complete
sp_v3.0_unigene3030 SustainPine v3.0 2295
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02820, mitochondrial; Flags: Precursor gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana] emb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3122 SustainPine v3.0 2589
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3246 SustainPine v3.0 1063
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 2.232e-17
C-terminus
sp_v3.0_unigene3272 SustainPine v3.0 1776
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g03390 2.274e-09
Complete
sp_v3.0_unigene3276 SustainPine v3.0 2828
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SJ92_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance pump, putative 5.046e-09
Complete
sp_v3.0_unigene3287 SustainPine v3.0 1025
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 6.356e-13
C-terminus
sp_v3.0_unigene3294 SustainPine v3.0 3226
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.995e-13
Complete
sp_v3.0_unigene3331 SustainPine v3.0 1374
AutoFact: Bidirectional sugar transporter SWEET1 n=2 Tax=Arabidopsis RepID=SWET1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 5.351e-21
Complete
sp_v3.0_unigene3430 SustainPine v3.0 3989
AutoFact: RecName: Full=125 kDa kinesin-related protein dbj|BAA23159.1| TKRP125 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bipolar kinesin KRP-130, putative 2.247e-11
Complete
sp_v3.0_unigene3485 SustainPine v3.0 1678
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q5XET4.1|PP142_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01860; AltName: Full=Protein EMBRYO DEFECTIVE 975 gb|AAU95418.1| At2g01860 [Arabidopsis thaliana] gb|A 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g01860; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene3513 SustainPine v3.0 1938
AutoFact: Auxin:hydrogen symporter, putative n=1 Tax=Ricinus communis RepID=B9S6X0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin:hydrogen symporter, putative 6.784e-16
Complete
sp_v3.0_unigene3671 SustainPine v3.0 1882
AutoFact: DNA-(Adenosine-N6-)-methyltransferase n=1 Tax=Picea abies RepID=Q3ZDL2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene3694 SustainPine v3.0 1436
AutoFact: Peptidase S24, S26A and S26B [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S24-like peptidase 8.619e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain