Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene197173 SustainPine v3.0 337
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene197468 SustainPine v3.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene197610 SustainPine v3.0 262
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene197923 SustainPine v3.0 241
AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene197984 SustainPine v3.0 156
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor emb|CAB511 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene198244 SustainPine v3.0 585
AutoFact: Herpes_gp2 multi-domain protein 9.0e-15
putative_coding
sp_v3.0_unigene198581 SustainPine v3.0 397
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.4013e-45
C-terminus
sp_v3.0_unigene198665 SustainPine v3.0 465
AutoFact: ADP-ribosylation factor-like protein 8B-A [Danio rerio] sp|Q6NZW8.1|AR8BA_DANRE RecName: Full=ADP-ribosylation factor-like protein 8B-A gb|AAH65942.1| ADP-ribosylation factor-like 8Ba [Danio rerio] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Arl8-family small GTPase 3.456e-13
N-terminus
sp_v3.0_unigene198755 SustainPine v3.0 439
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ERD4 protein 4.732e-09
C-terminus
sp_v3.0_unigene198757 SustainPine v3.0 395
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580 dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana] gb|AEE34255.1| pentatricopeptide rep 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene198848 SustainPine v3.0 415
AutoFact: Flap endonuclease 1-A n=1 Tax=Physcomitrella patens subsp. patens RepID=FEN11_PHYPA 2.00386e-43
FL-Next: sp=Flap endonuclease 1-A; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene199066 SustainPine v3.0 428
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 5.619e-36
C-terminus
sp_v3.0_unigene199077 SustainPine v3.0 418
AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: APO protein 3, mitochondrial, putative 4.17e-09
C-terminus
sp_v3.0_unigene199362 SustainPine v3.0 339
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 4.641e-12
C-terminus
sp_v3.0_unigene199822 SustainPine v3.0 358
AutoFact: 40S ribosomal protein S3, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5L603_9ALVE 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 9.473e-11
N-terminus
sp_v3.0_unigene199855 SustainPine v3.0 361
AutoFact: 40S ribosomal protein S3, putative n=3 Tax=rosids RepID=B9RK17_RICCO 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.183e-10
C-terminus
sp_v3.0_unigene200015 SustainPine v3.0 320
AutoFact: MIF4G and MA3 domain-containing protein [Arabidopsis thaliana] gb|AAC63673.1| putative eukaryotic initiation factor 4, eIF4 [Arabidopsis thaliana] gb|AEC07523.1| MIF4G and MA3 domain-containing protein [Arabidopsis thaliana] 3.0e-31
FL-Next: sp=Eukaryotic initiation factor iso-4F subunit p82-34; Triticum aestivum (Wheat). 0.0
Sma3: Translation initiation factor eIF(Iso)4G 6.042e-09
Internal
sp_v3.0_unigene200239 SustainPine v3.0 456
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.003e-09
C-terminus
sp_v3.0_unigene200321 SustainPine v3.0 338
AutoFact: Calreticulin n=15 Tax=Ixodes RepID=Q64K74_IXOSC 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 3.084e-31
N-terminus
sp_v3.0_unigene200657 SustainPine v3.0 713
AutoFact: Bidirectional sugar transporter SWEET3b n=1 Tax=Oryza sativa Japonica Group RepID=SWT3B_ORYSJ 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain