Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene185733 SustainPine v3.0 658
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Metzgeria furcata RepID=B3U205_9MARC 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene185926 SustainPine v3.0 358
AutoFact: pfam12854, PPR_1, PPR repeat 8.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene186596 SustainPine v3.0 487
AutoFact: PREDICTED: similar to signal peptidase 18 kDa subunit [Tribolium castaneum] gb|EEZ97812.1| hypothetical protein TcasGA2_TC000179 [Tribolium castaneum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S24-like peptidase 7.567e-09
N-terminus
sp_v3.0_unigene186636 SustainPine v3.0 443
AutoFact: 40S ribosomal protein S3-2 [Arabidopsis thaliana] sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2 gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana] emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana] gb|A 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 8.059e-11
C-terminus
sp_v3.0_unigene186730 SustainPine v3.0 729
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene187230 SustainPine v3.0 197
AutoFact: DNA methyl transferase4 [Zea mays] gb|AAK40306.1| DNA methyltransferase ZMET4 [Zea mays] gb|ACF82728.1| unknown [Zea mays] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA methyltransferase 1.765e-07
Internal
sp_v3.0_unigene187311 SustainPine v3.0 406
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 9.237e-18
C-terminus
sp_v3.0_unigene187594 SustainPine v3.0 268
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene188004 SustainPine v3.0 168
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene188035 SustainPine v3.0 1087
AutoFact: Pyruvate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9S976_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate decarboxylase 0.0
C-terminus
sp_v3.0_unigene188342 SustainPine v3.0 242
AutoFact: Aaa-metalloprotease chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FDU0_MICSR 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 8.829e-16
Internal
sp_v3.0_unigene188386 SustainPine v3.0 176
AutoFact: Protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T446_RICCO 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase 1.172e-09
Internal
sp_v3.0_unigene188581 SustainPine v3.0 358
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 7.502e-08
C-terminus
sp_v3.0_unigene188664 SustainPine v3.0 486
AutoFact: CBL-interacting protein kinase 22 [Populus trichocarpa] gb|ABK95707.1| unknown [Populus trichocarpa] 9.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 8.529e-38
Internal
sp_v3.0_unigene189160 SustainPine v3.0 874
AutoFact: MtN3_slv domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c oxidoreductase 6.638e-13
C-terminus
sp_v3.0_unigene189878 SustainPine v3.0 772
AutoFact: 40S ribosomal protein S3 [Gallus gallus] emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.29e-10
Complete
sp_v3.0_unigene190167 SustainPine v3.0 454
AutoFact: 60S ribosomal protein L15-1 n=9 Tax=rosids RepID=RL151_ARATH 0.0
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene190747 SustainPine v3.0 324
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 2.0e-14
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene191235 SustainPine v3.0 206
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 homolog 9.491e-10
Internal
sp_v3.0_unigene191554 SustainPine v3.0 393
AutoFact: Ribosomal protein L15 n=13 Tax=Trypanosomatidae RepID=Q4CTG9_TRYCR 9.99995e-41
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain