Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene168243 SustainPine v3.0 226
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene168253 SustainPine v3.0 174
AutoFact: cell division protein [Guillardia theta] sp|O78516.1|FTSH_GUITH RecName: Full=ATP-dependent zinc metalloprotease FtsH gb|AAC35738.1| hypothetical chloroplast RF25 [Guillardia theta] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.872e-14
Internal
sp_v3.0_unigene168259 SustainPine v3.0 238
AutoFact: Putative Putative Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Brassica oleracea RepID=Q5FAL7_BRAOL 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.597e-09
Internal
sp_v3.0_unigene168280 SustainPine v3.0 180
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745 dbj|BAB11377.1| unnamed protein product [Arabidopsi 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168281 SustainPine v3.0 181
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.968e-06
Internal
sp_v3.0_unigene168284 SustainPine v3.0 131
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene168306 SustainPine v3.0 233
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene168354 SustainPine v3.0 187
AutoFact: Unassigned protein
FL-Next: sp=Pentatricopeptide repeat-containing protein At4g16390, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene182868 SustainPine v3.0 1091
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 2.694e-38
Complete
sp_v3.0_unigene182872 SustainPine v3.0 1122
AutoFact: early-responsive to dehydration stress protein [Picea abies] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ERD4 protein 5.087e-09
C-terminus
sp_v3.0_unigene182993 SustainPine v3.0 877
AutoFact: exonuclease family protein [Arabidopsis thaliana] ref|NP_851082.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_851083.1| exonuclease family protein [Arabidopsis thaliana] ref|NP_974842.1| exonuclease family protein [Arabidopsis thaliana] dbj| 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Putative Complete
sp_v3.0_unigene183113 SustainPine v3.0 582
AutoFact: copper-binding protein-like [Oryza sativa Japonica Group] gb|EEE55406.1| hypothetical protein OsJ_03513 [Oryza sativa Japonica Group] 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene183425 SustainPine v3.0 566
AutoFact: 40S ribosomal protein S3 n=1 Tax=Xenopsylla cheopis RepID=A2IA98_9NEOP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 40S ribosomal protein 3.131e-07
N-terminus
sp_v3.0_unigene183919 SustainPine v3.0 514
AutoFact: Ribosomal protein L15 n=1 Tax=Blastocystis hominis RepID=D8LVC3_BLAHO 1.4013e-45
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene184115 SustainPine v3.0 527
AutoFact: similar to MAP/ERK kinase kinase 3 [Arabidopsis thaliana] 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase, putative 2.95e-10
C-terminus
sp_v3.0_unigene184121 SustainPine v3.0 501
AutoFact: rgd1, SGS3, lbl1; ragged seedling1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.953e-09
Internal
sp_v3.0_unigene184234 SustainPine v3.0 491
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE84116.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana GN=At4g18975 0.0
Sma3: EMB1417 1.214e-09
Internal
sp_v3.0_unigene184649 SustainPine v3.0 147
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 3.471e-20
Putative C-terminus
sp_v3.0_unigene185553 SustainPine v3.0 468
AutoFact: Protein kinase n=1 Tax=Glycine max RepID=C6ZS15_SOYBN 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rust resistance kinase Lr10 1.207e-36
Internal
sp_v3.0_unigene185688 SustainPine v3.0 332
AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9SWU6_HORVU 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rust resistance kinase Lr10 2.309e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain