Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167427 SustainPine v3.0 230
AutoFact: 60S ribosomal protein L15 n=13 Tax=leotiomyceta RepID=RL15_NEUCR 4.0e-10
FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene167466 SustainPine v3.0 284
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SGQ6.2|PP126_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g76280 gb|AEE35818.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-20
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g76280; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pentatricopeptide repeat-containing protein At1g76280 8.285e-06
Internal
sp_v3.0_unigene167558 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.13e-28
C-terminus
sp_v3.0_unigene167589 SustainPine v3.0 228
AutoFact: Carbohydrate kinase, PfkB [Medicago truncatula] 6.0e-18
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Putative C-terminus
sp_v3.0_unigene167621 SustainPine v3.0 227
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9M9R6.2|PPR43_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g14470 gb|AEE29168.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167723 SustainPine v3.0 172
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 4.951e-10
Internal
sp_v3.0_unigene167821 SustainPine v3.0 332
AutoFact: Serine carboxypeptidase, putative n=1 Tax=Ricinus communis RepID=B9RM65_RICCO 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine carboxypeptidase, putative 7.321e-23
Internal
sp_v3.0_unigene167828 SustainPine v3.0 328
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 5.206e-10
C-terminus
sp_v3.0_unigene167864 SustainPine v3.0 310
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 6.594e-31
C-terminus
sp_v3.0_unigene167894 SustainPine v3.0 231
AutoFact: Unassigned protein
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene167953 SustainPine v3.0 209
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.161e-10
Internal
sp_v3.0_unigene167981 SustainPine v3.0 281
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 5.693e-11
Internal
sp_v3.0_unigene168019 SustainPine v3.0 206
AutoFact: DNA (Cytosine-5)-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RP83_RICCO 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene168030 SustainPine v3.0 217
AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 2.667e-12
Internal
sp_v3.0_unigene168052 SustainPine v3.0 130
AutoFact: Os02g0555100 protein n=3 Tax=Oryza sativa RepID=Q0E0F3_ORYSJ 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os06g0613100 protein 4.873e-06
Internal
sp_v3.0_unigene168100 SustainPine v3.0 259
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene168107 SustainPine v3.0 174
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46790, chloroplastic; AltName: Full=Protein CHLORORESPIRATORY REDUCTION 2; Flags: Precursor emb|CAB511 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 3.517e-07
Internal
sp_v3.0_unigene168128 SustainPine v3.0 256
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 5.061e-11
Internal
sp_v3.0_unigene168134 SustainPine v3.0 165
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168216 SustainPine v3.0 174
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Pellia epiphylla RepID=B3U1Q7_9MARC 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain