Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11953 SustainPine v3.0 1713
AutoFact: S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] gb|AAK93650.1| unknown protein [Arabidopsis thaliana] gb|AAM67530.1| unknown protein [Arabidopsis thaliana] gb|AEE75944.1| S-adenosyl-L-methionine-dependent methyltran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12011 SustainPine v3.0 1333
AutoFact: puative protein [Arabidopsis thaliana] emb|CAB79800.1| puative protein [Arabidopsis thaliana] 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene12096 SustainPine v3.0 790
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RV98_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.325e-06
Putative N-terminus
sp_v3.0_unigene12100 SustainPine v3.0 636
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene12104 SustainPine v3.0 470
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene12150 SustainPine v3.0 2301
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Flags: Precursor dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana] 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At5g60960, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene12200 SustainPine v3.0 568
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.888e-11
Internal
sp_v3.0_unigene12250 SustainPine v3.0 1342
AutoFact: putative peptide transporter protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Oligopeptide transporter, putative 1.683e-17
C-terminus
sp_v3.0_unigene12303 SustainPine v3.0 1506
AutoFact: kinesin-like protein KIF18A [Danio rerio] gb|AAH47799.1| Zgc:55995 [Danio rerio] gb|AAI63966.1| Zgc:55995 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kif4, putative 1.915e-11
Putative Complete
sp_v3.0_unigene12330 SustainPine v3.0 1553
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene12385 SustainPine v3.0 646
AutoFact: S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] dbj|BAB10552.1| unnamed protein product [Arabidopsis thaliana] gb|AED97704.1| S-adenosyl-L-methionine-dependent methyltransferase domain-containing protei 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12422 SustainPine v3.0 1380
AutoFact: diacylglycerol kinase 3 [Arabidopsis thaliana] gb|AAL57635.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AAM98254.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AEC06799.1| diacylglycerol kinase 3 [Arabidopsis thaliana] 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Diacylglycerol kinase 1.256e-10
Internal
sp_v3.0_unigene12478 SustainPine v3.0 800
AutoFact: NAC-type transcription factor n=5 Tax=Oryza sativa RepID=B2CPX4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 2.212e-19
N-terminus
sp_v3.0_unigene12524 SustainPine v3.0 1790
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STK5.1|PP269_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48250, chloroplastic; Flags: Precursor emb|CAB41173.1| putative protein [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene12563 SustainPine v3.0 435
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50280, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1006; Flags: Precursor dbj|BAB09399.1| un 4.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene12581 SustainPine v3.0 657
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50280, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 1006; Flags: Precursor dbj|BAB09399.1| un 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene12604 SustainPine v3.0 537
AutoFact: receptor-like kinase LRK10 [Hordeum vulgare subsp. vulgare] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rust resistance kinase Lr10 7.776e-37
Internal
sp_v3.0_unigene12618 SustainPine v3.0 942
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAK25939.1|AF360229_1 unknown protein [Arabidopsis thaliana] dbj|BAB11608.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64088.1| unknown protein [Arabidopsis thaliana] gb|AED97903.1| uncharacteri 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12651 SustainPine v3.0 1283
AutoFact: kinesin like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable 125 kDa kinesin-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene12677 SustainPine v3.0 866
AutoFact: Cell division protein FtsH-like protein n=3 Tax=Arabidopsis RepID=Q8LBL6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 3.064e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain