Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10481 SustainPine v3.0 3864
AutoFact: IBN_N domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative transportin 8.893e-09
Complete
sp_v3.0_unigene10514 SustainPine v3.0 1210
AutoFact: H-ATPase [Oryza sativa Japonica Group] prf||1906387A H ATPase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plasma membrane H+-ATPase 0.0
N-terminus
sp_v3.0_unigene10520 SustainPine v3.0 563
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10637 SustainPine v3.0 1004
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12300, mitochondrial; Flags: Precursor dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr14 scaffold_190, whole genome shotgun sequence 1.373e-10
C-terminus
sp_v3.0_unigene10666 SustainPine v3.0 627
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 1.66e-10
C-terminus
sp_v3.0_unigene10685 SustainPine v3.0 930
AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 7.494e-23
Complete
sp_v3.0_unigene10727 SustainPine v3.0 2413
AutoFact: dgd1 suppressor 1 [Arabidopsis thaliana] gb|AAO00810.1| putative protein [Arabidopsis thaliana] gb|AAP37724.1| At5g12290 [Arabidopsis thaliana] gb|AED91788.1| dgd1 suppressor 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At5g12290 1.475e-09
Complete
sp_v3.0_unigene10787 SustainPine v3.0 641
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 8.306e-12
Putative C-terminus
sp_v3.0_unigene10845 SustainPine v3.0 689
AutoFact: UDP-glucuronosyltransferase, putative n=2 Tax=Ricinus communis RepID=B9SIN1_RICCO 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucuronosyltransferase, putative 2.401e-36
N-terminus
sp_v3.0_unigene10866 SustainPine v3.0 1840
AutoFact: CBL-interacting serine/threonine-protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T407_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 6.179e-38
Complete
sp_v3.0_unigene10898 SustainPine v3.0 1283
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene11179 SustainPine v3.0 429
AutoFact: DNA-(Adenosine-N6-)-methyltransferase n=1 Tax=Picea abies RepID=Q3ZDL2_PICAB 0.0
FL-Next: tr=DNA-(Adenosine-N6-)-methyltransferase; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene11368 SustainPine v3.0 1388
AutoFact: pfam12854, PPR_1, PPR repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.5e-10
Internal
sp_v3.0_unigene11415 SustainPine v3.0 1447
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3G5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11471 SustainPine v3.0 1086
AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] sp|Q9FMY1.1|C86B1_ARATH RecName: Full=Cytochrome P450 86B1 gb|AAK29622.1|AF345898_1 CYP86B1 [Arabidopsis thaliana] dbj|BAB11174.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN72056.1| cytochrome P4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 5.29e-26
C-terminus
sp_v3.0_unigene11503 SustainPine v3.0 2018
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.208e-16
Complete
sp_v3.0_unigene11533 SustainPine v3.0 533
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.449e-26
Internal
sp_v3.0_unigene11629 SustainPine v3.0 1811
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 1.152e-22
Putative Complete
sp_v3.0_unigene11787 SustainPine v3.0 1402
AutoFact: MtN3_slv domain containing protein 2.0e-24
FL-Next: sp=Bidirectional sugar transporter SWEET4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Seven-transmembrane-domain protein 1 1.501e-17
Complete
sp_v3.0_unigene11858 SustainPine v3.0 1491
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T9P1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Choline-phosphate cytidylyltransferase B 1.541e-12
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain