Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70 SustainPine v3.0 3486
AutoFact: pfam02364, Glucan_synthase, 1,3-beta-glucan synthase component 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 2.792e-37
Complete
sp_v3.0_unigene72 SustainPine v3.0 2622
AutoFact: Pyruvate decarboxylase 1 n=1 Tax=Lotus corniculatus RepID=Q84V95_LOTCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate decarboxylase 0.0
Complete
sp_v3.0_unigene179 SustainPine v3.0 2001
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 8.063e-23
Complete
sp_v3.0_unigene216 SustainPine v3.0 2258
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EEE56247.1| hypothetical protein OsJ_05263 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene223 SustainPine v3.0 1363
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.422e-07
C-terminus
sp_v3.0_unigene224 SustainPine v3.0 2058
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene274 SustainPine v3.0 1377
AutoFact: MtN3_slv domain containing protein 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seven-transmembrane-domain protein 1 1.533e-17
Complete
sp_v3.0_unigene276 SustainPine v3.0 1814
AutoFact: metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Phosphonate metabolism protein, putative 4.49e-09
Putative Complete
sp_v3.0_unigene277 SustainPine v3.0 650
AutoFact: Ubiquitin-protein ligase-like protein n=1 Tax=Pyrus communis RepID=A4ZV36_PYRCO 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene316 SustainPine v3.0 2472
AutoFact: CBL-interacting protein kinase 3 n=8 Tax=rosids RepID=A0MNJ1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 1.304e-34
Complete
sp_v3.0_unigene385 SustainPine v3.0 1088
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.591e-09
Putative Complete
sp_v3.0_unigene520 SustainPine v3.0 1372
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [Arabido 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At3g46870; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene532 SustainPine v3.0 3855
AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9RAN8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 3.351e-37
Complete
sp_v3.0_unigene587 SustainPine v3.0 3181
AutoFact: ALG2-interacting protein X [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ALG2-interacting protein X 8.408e-10
Complete
sp_v3.0_unigene604 SustainPine v3.0 921
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|ABK28304.1| unknown [Arabidopsis thaliana] gb|AEE81971.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene611 SustainPine v3.0 1908
AutoFact: pentatricopeptide repeat protein [Oryza sativa Japonica Group] gb|EAZ14485.1| hypothetical protein OsJ_04408 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_621, whole genome shotgun sequence 8.772e-06
Putative N-terminus
sp_v3.0_unigene690 SustainPine v3.0 2701
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 homolog 4.169e-09
Complete
sp_v3.0_unigene707 SustainPine v3.0 2570
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGU0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene780 SustainPine v3.0 1501
AutoFact: metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] gb|AAR24228.1| At1g30300 [Arabidopsis thaliana] gb|AAR92355.1| At1g30300 [Arabidopsis thaliana] gb|AEE31204.1| metallo-beta-lactamase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Hydrolase-like protein 1.31e-10
C-terminus
sp_v3.0_unigene851 SustainPine v3.0 1963
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S1R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain