Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA-directed DNA polymerase, family B, conserved site

Term: IPR017964  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene23586 SustainPine v3.0 1612
AutoFact: Probable protein phosphatase 2C 59 n=5 Tax=Magnoliophyta RepID=P2C59_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 3.682e-24
Complete
sp_v3.0_unigene24161 SustainPine v3.0 2014
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RL74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 9.854e-23
Complete
sp_v3.0_unigene31308 SustainPine v3.0 706
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVW3_VITVI 1.0e-20
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 2.179e-06
N-terminus
sp_v3.0_unigene37282 SustainPine v3.0 603
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAA16605.1| putative protein [Arabidopsis thaliana] emb|CAB78997.1| putative protein [Arabidopsis thaliana] gb|AEE84253.1| uncharacterized protein [Arabidopsis thaliana] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein, putative, expressed 1.042e-08
C-terminus
sp_v3.0_unigene39174 SustainPine v3.0 301
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene39424 SustainPine v3.0 1028
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB52444.1| putative protein [Arabidopsis thaliana] emb|CAB79789.1| putative protein [Arabidopsis thaliana] gb|AAO00896.1| putative protein [Arabidopsis thaliana] dbj|BAE99258.1| hypothetical protein [Ara 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene43383 SustainPine v3.0 163
unknown
sp_v3.0_unigene48849 SustainPine v3.0 317
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene50055 SustainPine v3.0 401
AutoFact: DNA polymerase alpha catalytic subunit n=1 Tax=Arabidopsis thaliana RepID=F4K285_ARATH 1.0e-30
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA polymerase alpha catalytic subunit 2.258e-09
Internal
sp_v3.0_unigene53283 SustainPine v3.0 218
AutoFact: DNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U238_VITVI 1.0e-16
FL-Next: sp=DNA polymerase; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: DNA polymerase 2.752e-09
N-terminus
sp_v3.0_unigene53329 SustainPine v3.0 435
AutoFact: DUF566 domain containing protein 2.0e-33
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene54851 SustainPine v3.0 476
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAA16605.1| putative protein [Arabidopsis thaliana] emb|CAB78997.1| putative protein [Arabidopsis thaliana] gb|AEE84253.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene59919 SustainPine v3.0 338
AutoFact: DNA polymerase n=2 Tax=Andropogoneae RepID=C5XR76_SORBI 3.0e-24
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase 3.944e-17
Internal
sp_v3.0_unigene62227 SustainPine v3.0 119
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpX n=2 Tax=Zea mays RepID=B6SSC5_MAIZE 6.0e-11
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 3.827e-11
Internal
sp_v3.0_unigene63053 SustainPine v3.0 327
AutoFact: DNA polymerase (Fragment) n=2 Tax=Triticum aestivum RepID=D8L9N3_WHEAT 7.0e-39
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA polymerase alpha catalytic subunit 3.801e-09
Internal
sp_v3.0_unigene64459 SustainPine v3.0 190
AutoFact: ATP-dependent clp protease ATP-binding subunit clpx n=1 Tax=Cucumis melo subsp. melo RepID=E5GBA0_CUCME 4.0e-20
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent clp protease ATP-binding subunit clpx, putative 3.756e-11
Internal
sp_v3.0_unigene66189 SustainPine v3.0 307
AutoFact: Nucleotid_trans domain containing protein 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Regulatory protein, putative, expressed 1.066e-08
Internal
sp_v3.0_unigene72091 SustainPine v3.0 140
AutoFact: Unassigned protein
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72806 SustainPine v3.0 224
AutoFact: DNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=D7U4B5_VITVI 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA polymerase 3.515e-23
C-terminus
sp_v3.0_unigene73887 SustainPine v3.0 372
AutoFact: Nucleotid_trans domain containing protein 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os01g0920500 protein 9.747e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain