Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cell wall modification

Term: GO:0042545  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene66168 SustainPine v3.0 416
AutoFact: LRRNT_2 domain containing protein 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 2.145e-13
Putative N-terminus
sp_v3.0_unigene66404 SustainPine v3.0 261
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66442 SustainPine v3.0 390
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.19496e-42
N-terminus
sp_v3.0_unigene66465 SustainPine v3.0 364
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative xyloglucan endotransglycosylase 8.536e-18
N-terminus
sp_v3.0_unigene67364 SustainPine v3.0 419
AutoFact: Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 5.349e-11
Putative N-terminus
sp_v3.0_unigene68082 SustainPine v3.0 161
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 4.283e-39
Internal
sp_v3.0_unigene68584 SustainPine v3.0 142
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=D5AB84_PICSI 2.0e-14
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 9.994e-08
Internal
sp_v3.0_unigene68926 SustainPine v3.0 157
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 2.0e-13
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene69712 SustainPine v3.0 193
AutoFact: Unassigned protein
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70139 SustainPine v3.0 418
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative xyloglucan endotransglycosylase 5.038e-15
N-terminus
sp_v3.0_unigene70400 SustainPine v3.0 236
AutoFact: Pectinesterase (Fragment) n=2 Tax=Picea RepID=A5X524_PICAB 5.0e-26
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 3.123e-12
C-terminus
sp_v3.0_unigene71191 SustainPine v3.0 216
AutoFact: Pectinesterase n=1 Tax=Oncidium Gower Ramsey RepID=B6V9S5_ONCHC 3.0e-09
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 1.185e-25
Putative C-terminus
sp_v3.0_unigene71766 SustainPine v3.0 158
AutoFact: Probable pectinesterase/pectinesterase inhibitor 7 n=1 Tax=Arabidopsis thaliana RepID=PME7_ARATH 3.0e-13
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Pectinesterase 2.476e-39
Internal
sp_v3.0_unigene71822 SustainPine v3.0 343
AutoFact: Pectinesterase n=1 Tax=Sorghum bicolor RepID=C5Z1D0_SORBI 5.0e-23
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 2.886e-16
C-terminus
sp_v3.0_unigene71845 SustainPine v3.0 352
AutoFact: Putative Receptor-like protein kinase [Oryza sativa Japonica Group] gb|AAP53414.1| Leucine Rich Repeat family protein, expressed [Oryza sativa Japonica Group] gb|EAZ15874.1| hypothetical protein OsJ_31295 [Oryza sativa Japonica Group] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 1.119e-17
Internal
sp_v3.0_unigene71863 SustainPine v3.0 286
AutoFact: Probable pectinesterase/pectinesterase inhibitor 41 n=2 Tax=Arabidopsis RepID=PME41_ARATH 1.0e-27
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Putative C-terminus
sp_v3.0_unigene72121 SustainPine v3.0 277
AutoFact: pectinesterase 11 [Arabidopsis thaliana] sp|Q9SIJ9.1|PME11_ARATH RecName: Full=Putative pectinesterase 11; Short=PE 11; AltName: Full=Pectin methylesterase 11; Short=AtPME11 gb|AAD23644.1| putative pectinesterase [Arabidopsis thaliana] gb|AEC07202.1| pect 5.0e-18
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 1.725e-11
Internal
sp_v3.0_unigene72185 SustainPine v3.0 165
AutoFact: Pectinesterase n=2 Tax=Vitis vinifera RepID=A5B5Z3_VITVI 2.0e-12
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 1.643e-09
Internal
sp_v3.0_unigene74942 SustainPine v3.0 233
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 5.0e-21
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Putative C-terminus
sp_v3.0_unigene75488 SustainPine v3.0 247
AutoFact: Putative pectin methylesterase (Fragment) n=1 Tax=Picea abies RepID=A5X523_PICAB 2.0e-17
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Sma3: Putative pectin methylesterase 1.411e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain