Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topological change

Term: GO:0006265  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene113929 SustainPine v3.0 384
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RQX7_RICCO 0.0
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Sma3: Myosin 2.969e-24
Internal
sp_v3.0_unigene122169 SustainPine v3.0 246
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9S596_RICCO 6.0e-35
FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
Sma3: Myosin 1.368e-24
Internal
sp_v3.0_unigene124749 SustainPine v3.0 163
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Myosin XI, putative 1.077e-15
Internal
sp_v3.0_unigene128050 SustainPine v3.0 719
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.848e-07
Internal
sp_v3.0_unigene129382 SustainPine v3.0 291
AutoFact: DNA topoisomerase n=1 Tax=Populus trichocarpa RepID=B9H4K8_POPTR 6.0e-07
FL-Next: sp=DNA topoisomerase; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene130346 SustainPine v3.0 273
AutoFact: myosin-like protein [Arabidopsis thaliana] 1.0e-38
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Myosin XI, putative 1.145e-15
Internal
sp_v3.0_unigene137627 SustainPine v3.0 167
unknown
sp_v3.0_unigene138108 SustainPine v3.0 210
AutoFact: DNA topoisomerase 2 n=2 Tax=Malus x domestica RepID=Q2L363_MALDO 1.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 2.973e-35
Internal
sp_v3.0_unigene141014 SustainPine v3.0 871
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 2.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Sma3: Topoisomerase I 2.543e-25
Internal
sp_v3.0_unigene142581 SustainPine v3.0 462
AutoFact: DNA topoisomerase II, putative n=1 Tax=Ricinus communis RepID=B9RVN3_RICCO 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene149164 SustainPine v3.0 111
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 3.0e-08
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149345 SustainPine v3.0 218
AutoFact: F1L3.28 n=1 Tax=Arabidopsis thaliana RepID=Q9LNP7_ARATH 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Myosin XI 2.485e-27
Internal
sp_v3.0_unigene151812 SustainPine v3.0 543
AutoFact: Topoisomerase IV subunit A n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHZ0_9GAMM 0.0
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 7.399e-09
Internal
sp_v3.0_unigene152974 SustainPine v3.0 366
AutoFact: DNA gyrase subunit B n=82 Tax=Bacteroidetes RepID=A6GX10_FLAPJ 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA gyrase subunit B, chloroplastic/mitochondrial 1.351e-08
Internal
sp_v3.0_unigene157868 SustainPine v3.0 345
AutoFact: Similar to uniprot|P04786 Saccharomyces cerevisiae YOL006c TOP1 DNA topoisomerase I n=1 Tax=Candida glabrata CBS 138 RepID=Q6FNH4_CANGA 2.0e-18
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene160034 SustainPine v3.0 432
AutoFact: DNA topoisomerase n=5 Tax=Poaceae RepID=Q0J0S6_ORYSJ 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Sma3: Putative DNA topoisomerase III beta 1.251e-08
Internal
sp_v3.0_unigene161857 SustainPine v3.0 155
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 1.0e-07
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Internal
sp_v3.0_unigene165174 SustainPine v3.0 197
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-23
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal
sp_v3.0_unigene168175 SustainPine v3.0 274
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 1.0e-33
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 5.04047e-42
Internal
sp_v3.0_unigene168348 SustainPine v3.0 205
AutoFact: DNA topoisomerase 2 n=2 Tax=Oryza sativa Japonica Group RepID=Q6Z8D9_ORYSJ 5.0e-29
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain