Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA topological change

Term: GO:0006265  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56302 SustainPine v3.0 184
AutoFact: Unassigned protein 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene56621 SustainPine v3.0 176
AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 1.0e-18
FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
Sma3: DNA topoisomerase 2 3.095e-35
Internal
sp_v3.0_unigene56877 SustainPine v3.0 262
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene57192 SustainPine v3.0 272
AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE 2.0e-16
FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
Sma3: Probable DNA gyrase subunit A, chloroplastic/mitochondrial 3.06e-09
Internal
sp_v3.0_unigene58359 SustainPine v3.0 232
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 4.0e-12
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 1.459e-38
Internal
sp_v3.0_unigene58528 SustainPine v3.0 221
AutoFact: DNA topoisomerase 2 n=1 Tax=Nicotiana tabacum RepID=Q8GSC4_TOBAC 4.0e-10
FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA topoisomerase 2 4.921e-32
Internal
sp_v3.0_unigene58745 SustainPine v3.0 238
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 2.0e-18
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 7.14e-07
Internal
sp_v3.0_unigene59594 SustainPine v3.0 359
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59658 SustainPine v3.0 238
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 2.0e-27
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 9.059e-07
Internal
sp_v3.0_unigene62162 SustainPine v3.0 257
AutoFact: DNA topoisomerase III [Arabidopsis thaliana] dbj|BAA96895.1| DNA topoisomerase III [Arabidopsis thaliana] gb|ACA50279.1| topoisomerase 3 alpha [Arabidopsis thaliana] gb|AED97816.1| DNA topoisomerase III [Arabidopsis thaliana] 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62199 SustainPine v3.0 308
AutoFact: myosin [Arabidopsis thaliana] dbj|BAD94158.1| myosin [Arabidopsis thaliana] dbj|BAD94177.1| myosin [Arabidopsis thaliana] 9.99995e-41
FL-Next: tr=Myosin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Myosin XI, putative 8.838e-19
Internal
sp_v3.0_unigene63464 SustainPine v3.0 124
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 2.0e-09
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 2.313e-07
Internal
sp_v3.0_unigene63970 SustainPine v3.0 229
AutoFact: DNA topoisomerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U3N3_PHYPA 3.0e-25
FL-Next: sp=DNA topoisomerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative DNA topoisomerase III beta 1.635e-08
Internal
sp_v3.0_unigene64887 SustainPine v3.0 206
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Ricinus communis RepID=B9SN22_RICCO 2.0e-18
FL-Next: sp=DNA topoisomerase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene65103 SustainPine v3.0 257
AutoFact: Probable DNA gyrase subunit A, chloroplastic/mitochondrial n=2 Tax=Arabidopsis RepID=GYRA_ARATH 2.0e-16
FL-Next: sp=Probable DNA gyrase subunit A, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65245 SustainPine v3.0 267
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-20
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Integrase 3.664e-09
Putative C-terminus
sp_v3.0_unigene69505 SustainPine v3.0 205
AutoFact: DNA topoisomerase n=1 Tax=Tribolium castaneum RepID=D2A047_TRICA 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene70821 SustainPine v3.0 337
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 3.082e-09
Internal
sp_v3.0_unigene71560 SustainPine v3.0 278
AutoFact: RVT_1 domain containing protein 5.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 5.4e-06
Putative C-terminus
sp_v3.0_unigene71660 SustainPine v3.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain