Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromosome

Term: GO:0005694  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene99463 SustainPine v3.0 669
• AutoFact: putative RAD50 DNA repair protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene100046 SustainPine v3.0 462
• AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6M9_POPTR 2.0e-33
• FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Facilitates chromatin transcription complex subunit SPT16 3.677e-13
Internal
sp_v3.0_unigene101874 SustainPine v3.0 346
• AutoFact: DIL domain containing protein 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI, putative 3.949e-16
C-terminus
sp_v3.0_unigene102688 SustainPine v3.0 683
• AutoFact: unconventional myosin [Helianthus annuus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Myosin XI, putative 4.075e-23
Internal
sp_v3.0_unigene102960 SustainPine v3.0 721
• AutoFact: meiotic recombination protein SPO11-2 [Arabidopsis thaliana] sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2; Short=AtSPO11-2 emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana] gb|ABE65738.1| DNA topoisomerase VI 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative SPO11 protein 2.121e-09
N-terminus
sp_v3.0_unigene103054 SustainPine v3.0 449
• AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 3.0e-28
• FL-Next: sp=DNA topoisomerase; Ricinus communis (Castor bean). 0.0
• Sma3: Putative DNA topoisomerase III beta 7.196e-09
C-terminus
sp_v3.0_unigene103978 SustainPine v3.0 315
• AutoFact: Protein MIM n=3 Tax=Arabidopsis RepID=Q9FII7_ARATH 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: SMC-like protein 1.54e-09
Internal
sp_v3.0_unigene104609 SustainPine v3.0 450
• AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI 4.391e-28
Internal
sp_v3.0_unigene104852 SustainPine v3.0 491
• AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 7.0e-30
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105211 SustainPine v3.0 263
• AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Myosin XI, putative 4.487e-23
Internal
sp_v3.0_unigene105557 SustainPine v3.0 463
• AutoFact: Os08g0156900 protein n=4 Tax=Oryza sativa RepID=Q6ZD95_ORYSJ 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative SPO11 protein 2.258e-09
Internal
sp_v3.0_unigene106163 SustainPine v3.0 370
• AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 4.2039e-45
• FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
• Sma3: Myosin XI, putative 5.765e-23
Internal
sp_v3.0_unigene107256 SustainPine v3.0 371
• AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 8.0e-29
• FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
• Sma3: Global transcription factor group 2.502e-10
Internal
sp_v3.0_unigene108801 SustainPine v3.0 604
• AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Target of rapamycin kinase 1.134e-11
Putative N-terminus
sp_v3.0_unigene113115 SustainPine v3.0 442
• AutoFact: Meiotic recombination protein SPO11-1 n=2 Tax=Arabidopsis RepID=SPO11_ARATH 0.0
• FL-Next: sp=Meiotic recombination protein SPO11-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene113406 SustainPine v3.0 240
• AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I6M9_POPTR 9.0e-21
• FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
• Sma3: Facilitates chromatin transcription complex subunit SPT16 2.911e-13
Internal
sp_v3.0_unigene113929 SustainPine v3.0 384
• AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RQX7_RICCO 0.0
• FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Myosin 2.969e-24
Internal
sp_v3.0_unigene114260 SustainPine v3.0 486
• AutoFact: FACT complex subunit SPT16 [Zea mays] sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT complex subunit SPT16; AltName: Full=Facilitates chromatin transcription complex subunit SPT16; AltName: Full=Global transcription factor group C protein 102 gb|AAN41252.1| g 2.0e-23
• FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Global transcription factor group 2.57e-10
N-terminus
sp_v3.0_unigene118130 SustainPine v3.0 299
• AutoFact: FACT complex subunit SPT16 n=4 Tax=Oryza sativa RepID=SPT16_ORYSJ 1.0e-20
• FL-Next: sp=FACT complex subunit SPT16; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Facilitates chromatin transcription complex subunit SPT16 2.783e-09
Internal
sp_v3.0_unigene118324 SustainPine v3.0 212
• AutoFact: GlimmerM protein 276 n=1 Tax=Beta vulgaris RepID=Q20CC6_BETVU 3.0e-24
• FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Serine/threonine-protein kinase ATR 1.251e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain