Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr18 scaffold_1, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1082 SustainPine v3.0 3283
AutoFact: vacuolar sorting protein 35 [Arabidopsis thaliana] gb|AEE35765.1| vacuolar sorting protein 35 [Arabidopsis thaliana] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 35B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene2741 SustainPine v3.0 1861
AutoFact: cytoplasmic tRNA 2-thiolation protein 1 [Arabidopsis thaliana] sp|O64862.2|CTU1_ARATH RecName: Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName: Full=Cytoplasmic tRNA adenylyltransferase 1 dbj|BAC41934.1| unknown protein [Arabidopsis thaliana] gb|AAP 0.0
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene3551 SustainPine v3.0 2327
AutoFact: TCP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJD1_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5670 SustainPine v3.0 2322
AutoFact: Precursor of protein cell division protease ftsh-like protein n=4 Tax=Magnoliophyta RepID=B9GQ31_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
C-terminus
sp_v3.0_unigene7090 SustainPine v3.0 1093
AutoFact: Unassigned protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 1.998e-14
Complete
sp_v3.0_unigene7558 SustainPine v3.0 2456
AutoFact: vacuolar protein sorting-associated protein 45-like protein [Arabidopsis thaliana] sp|O49048.2|VPS45_ARATH RecName: Full=Vacuolar protein sorting-associated protein 45 homolog; Short=AtVPS45 gb|AAC34344.1| AtVPS45p [Arabidopsis thaliana] gb|AAK91388.1| At 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 45 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene12936 SustainPine v3.0 1796
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene14772 SustainPine v3.0 618
AutoFact: putative family II lipase EXL3 [Arabidopsis thaliana] 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 5.597e-06
C-terminus
sp_v3.0_unigene20171 SustainPine v3.0 2250
AutoFact: inositol phosphate kinase [Glycine max] 0.0
FL-Next: sp=Inositol-tetrakisphosphate 1-kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene22578 SustainPine v3.0 1228
AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9R814_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene25127 SustainPine v3.0 679
AutoFact: pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 3.419e-06
C-terminus
sp_v3.0_unigene30520 SustainPine v3.0 975
AutoFact: Unassigned protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 1.998e-14
Complete
sp_v3.0_unigene34055 SustainPine v3.0 2512
AutoFact: Lysine histidine transporter-like 8 n=5 Tax=rosids RepID=LHTL8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34164 SustainPine v3.0 2772
AutoFact: Mitochondrial substrate carrier family protein [Arabidopsis thaliana] dbj|BAA97309.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gb|AAP40437.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gb|AAU90078.1| At5g64970 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene52940 SustainPine v3.0 374
AutoFact: protein EXORDIUM like 2 [Arabidopsis thaliana] gb|AAG41473.1|AF326891_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK00390.1|AF339708_1 putative phi-1 protein [Arabidopsis thaliana] gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10 [Arabidopsis thaliana] 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 9.306e-06
Putative N-terminus
sp_v3.0_unigene70805 SustainPine v3.0 335
AutoFact: patatin-like protein [Arabidopsis thaliana] gb|AEE86747.1| patatin-like protein [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 3.13e-09
Internal
sp_v3.0_unigene99177 SustainPine v3.0 642
AutoFact: Unassigned protein 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 7.994e-15
Complete
sp_v3.0_unigene103856 SustainPine v3.0 350
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 4.181e-07
Internal
sp_v3.0_unigene127545 SustainPine v3.0 1310
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 4.78e-11
Complete
sp_v3.0_unigene129861 SustainPine v3.0 472
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8D0_RICCO 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_1, whole genome shotgun sequence 3.095e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain