Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA methyltransferase activity

Term: GO:0008173  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene729 SustainPine v3.0 1589
• AutoFact: Putative tRNA/rRNA methyltransferase n=3 Tax=Oryza sativa RepID=Q5JKV8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene923 SustainPine v3.0 1604
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_17, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene1706 SustainPine v3.0 696
• AutoFact: RNA methyltransferase family protein [Arabidopsis thaliana] dbj|BAB01724.1| RNA methyltransferase-like protein [Arabidopsis thaliana] gb|AEE76490.1| RNA methyltransferase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene2744 SustainPine v3.0 1476
• AutoFact: tRNA/rRNA methyltransferase (SpoU) family protein n=3 Tax=Arabidopsis RepID=F4JP86_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA methyltransferase 4.711e-09
Putative C-terminus
sp_v3.0_unigene4969 SustainPine v3.0 876
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene5412 SustainPine v3.0 1508
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene11500 SustainPine v3.0 2848
• AutoFact: [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene12350 SustainPine v3.0 630
• AutoFact: OBP33pep like protein n=3 Tax=Arabidopsis RepID=Q9SUL3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene13995 SustainPine v3.0 562
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T2B4_RICCO 5.0e-33
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene14720 SustainPine v3.0 914
• AutoFact: tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] emb|CAB89349.1| rRNA methylase-like protein [Arabidopsis thaliana] dbj|BAF00727.1| rRNA methylase - like protein [Arabidopsis thaliana] gb|AED92155.1| tRNA/rRNA methyltransferase (Sp 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RRNA methylase-like protein 6.546e-10
C-terminus
sp_v3.0_unigene16461 SustainPine v3.0 629
• AutoFact: Putative FtsJ cell division protein n=1 Tax=Oryza sativa Japonica Group RepID=Q852A4_ORYSJ 4.0e-19
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
C-terminus
sp_v3.0_unigene17934 SustainPine v3.0 1734
• AutoFact: RNA methyltransferase family protein [Arabidopsis thaliana] dbj|BAB01724.1| RNA methyltransferase-like protein [Arabidopsis thaliana] gb|AEE76490.1| RNA methyltransferase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene24041 SustainPine v3.0 531
• AutoFact: Unassigned protein 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28003 SustainPine v3.0 387
• AutoFact: pfam00588, SpoU_methylase, SpoU rRNA Methylase family 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene28072 SustainPine v3.0 1198
• AutoFact: [J] COG0219 Predicted rRNA methylase (SpoU class) 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene29129 SustainPine v3.0 1715
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene50208 SustainPine v3.0 573
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T2B4_RICCO 7.0e-25
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene52903 SustainPine v3.0 432
• AutoFact: FtsJ n=2 Tax=Arabidopsis RepID=Q9SXH3_ARATH 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene56695 SustainPine v3.0 402
• AutoFact: Putative tRNA/rRNA methyltransferase n=3 Tax=Oryza sativa RepID=Q5JKV8_ORYSJ 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene57911 SustainPine v3.0 320
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain