Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PAN-2 domain

Term: IPR013227  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40017 SustainPine v3.0 283
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-23
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.234e-36
Internal
sp_v3.0_unigene40039 SustainPine v3.0 769
AutoFact: S-receptor kinase, putative n=1 Tax=Ricinus communis RepID=B9RP41_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-receptor kinase, putative 4.888e-16
Internal
sp_v3.0_unigene40694 SustainPine v3.0 1232
AutoFact: S-locus-specific glycoprotein S13 precursor, putative (EC:2.7.10.2) 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 3.212e-06
C-terminus
sp_v3.0_unigene41074 SustainPine v3.0 248
AutoFact: RVT_2 domain containing protein 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 4.615e-19
Internal
sp_v3.0_unigene41185 SustainPine v3.0 232
AutoFact: Unassigned protein 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42222 SustainPine v3.0 144
AutoFact: Epidermis-specific secreted glycoprotein EP1, putative n=1 Tax=Ricinus communis RepID=B9SI26_RICCO 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Epidermis-specific secreted glycoprotein EP1, putative 3.933e-10
Internal
sp_v3.0_unigene42288 SustainPine v3.0 1694
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.022e-14
Putative N-terminus
sp_v3.0_unigene42470 SustainPine v3.0 1109
AutoFact: B_lectin domain containing protein 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene43109 SustainPine v3.0 294
AutoFact: proline-rich receptor-like protein kinase [Arabidopsis thaliana] gb|AEE86106.1| proline-rich receptor-like protein kinase [Arabidopsis thaliana] 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Somatic embryogenesis receptor kinase-like protein 3.061e-07
Internal
sp_v3.0_unigene43752 SustainPine v3.0 397
AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 2.0e-24
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene44271 SustainPine v3.0 466
AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] sp|Q9C5S9.1|CRK6_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 6; Short=Cysteine-rich RLK6; AltName: Full=Receptor-like protein kinase 5; Flags: Precursor gb|AAK28316.1|A 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 1.777e-15
Internal
sp_v3.0_unigene45373 SustainPine v3.0 283
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.766e-21
Internal
sp_v3.0_unigene46047 SustainPine v3.0 2087
AutoFact: pfam01453, B_lectin, D-mannose binding lectin 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr12 scaffold_18, whole genome shotgun sequence 2.714e-09
Complete
sp_v3.0_unigene46117 SustainPine v3.0 1319
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.154e-23
Putative Complete
sp_v3.0_unigene46726 SustainPine v3.0 298
AutoFact: Bromodomain protein n=1 Tax=Populus trichocarpa RepID=B9GQ03_POPTR 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain-containing protein 6.044e-17
Putative C-terminus
sp_v3.0_unigene46789 SustainPine v3.0 329
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.483e-34
Internal
sp_v3.0_unigene47323 SustainPine v3.0 231
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ45_CYCRE 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.057e-33
Internal
sp_v3.0_unigene47834 SustainPine v3.0 810
AutoFact: receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 3.11e-13
Internal
sp_v3.0_unigene47966 SustainPine v3.0 848
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.2039e-45
N-terminus
sp_v3.0_unigene47997 SustainPine v3.0 404
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.086e-25
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain