Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbon fixation

Term: GO:0015977  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146587 SustainPine v3.0 651
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=C0PPY1_PICSI 3.0e-09
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 7.49e-32
C-terminus
sp_v3.0_unigene149384 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene149614 SustainPine v3.0 395
AutoFact: phosphoenolpyruvate carboxylase [Ricinus communis] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150940 SustainPine v3.0 327
AutoFact: Ribulose bisphosphate carboxylase large chain n=118 Tax=Eukaryota RepID=RBL_BRYMA 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase large chain; Araucaria cunninghamii (Hoop pine) (Moreton Bay pine). Plastid; Chloroplast. 0.0
Sma3: RuBisCO large subunit 2.012e-11
Putative N-terminus
sp_v3.0_unigene152128 SustainPine v3.0 305
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO 3.0e-10
FL-Next: sp=Ribulose bisphosphate carboxylase small chain 2, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
C-terminus
sp_v3.0_unigene166405 SustainPine v3.0 231
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=B8LPE7_PICSI 3.0e-08
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene191833 SustainPine v3.0 625
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene207879 SustainPine v3.0 419
AutoFact: Ribulose bisphosphate carboxylase small chain n=6 Tax=Pinaceae RepID=A9NZM2_PICSI 2.0e-26
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 7.303e-10
Putative Complete
sp_v3.0_unigene208473 SustainPine v3.0 669
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene208497 SustainPine v3.0 382
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain