Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribulose bisphosphate carboxylase small chain, domain

Term: IPR000894  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65448 SustainPine v3.0 169
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-19
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 9.209e-29
Internal
sp_v3.0_unigene65636 SustainPine v3.0 170
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Lactuca sativa RepID=RBS_LACSA 5.0e-15
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene67621 SustainPine v3.0 406
AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene67675 SustainPine v3.0 384
AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 7.0e-15
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Larix laricina (Tamarack) (Pinus laricina). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 3.81e-24
C-terminus
sp_v3.0_unigene68243 SustainPine v3.0 363
AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 2.94273e-44
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus
sp_v3.0_unigene68361 SustainPine v3.0 281
AutoFact: Ribulose bisphosphate carboxylase small chain n=3 Tax=Triticeae RepID=Q9FRZ3_WHEAT 8.0e-40
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene72096 SustainPine v3.0 233
AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 7.0e-28
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative C-terminus
sp_v3.0_unigene73541 SustainPine v3.0 281
AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-07
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 3.966e-07
Putative N-terminus
sp_v3.0_unigene73549 SustainPine v3.0 406
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 1.4013e-45
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
N-terminus
sp_v3.0_unigene73694 SustainPine v3.0 446
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 2.231e-24
C-terminus
sp_v3.0_unigene74811 SustainPine v3.0 240
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 3.0e-15
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene75661 SustainPine v3.0 377
AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-15
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Putative Complete
sp_v3.0_unigene77509 SustainPine v3.0 257
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 5.0e-27
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 7.633e-31
Putative C-terminus
sp_v3.0_unigene78428 SustainPine v3.0 233
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI 4.0e-29
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene79159 SustainPine v3.0 402
AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 9.0e-13
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 5.027e-36
Putative Complete
sp_v3.0_unigene79254 SustainPine v3.0 105
AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 4.0e-09
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Internal
sp_v3.0_unigene124324 SustainPine v3.0 129
AutoFact: Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Pinus pinaster RepID=Q8RVI7_PINPS 7.0e-10
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain, chloroplastic 3.966e-07
Putative C-terminus
sp_v3.0_unigene127014 SustainPine v3.0 353
AutoFact: RuBisCO_small domain containing protein 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SnRK1-interacting protein 1 1.972e-15
C-terminus
sp_v3.0_unigene127440 SustainPine v3.0 1092
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Complete
sp_v3.0_unigene127961 SustainPine v3.0 614
AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain