Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: glycine metabolic process

Term: GO:0006544  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene225 SustainPine v3.0 2398
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene439 SustainPine v3.0 2213
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Complete
sp_v3.0_unigene4166 SustainPine v3.0 2860
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4227 SustainPine v3.0 2357
AutoFact: octopine synthase binding factor3 [Zea mays] emb|CAA48904.1| ocs-element binding factor 3.2 [Zea mays] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene8224 SustainPine v3.0 2003
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BZIP transcription factor 4.754e-19
Complete
sp_v3.0_unigene9093 SustainPine v3.0 2563
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH glutamate synthase 6.97e-11
N-terminus
sp_v3.0_unigene12747 SustainPine v3.0 1041
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene23601 SustainPine v3.0 4280
AutoFact: Precursor of carboxylase p-protein 1, glycine decarboxylase complex n=4 Tax=core eudicotyledons RepID=B9HDN2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene24073 SustainPine v3.0 773
AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9SMY1_RICCO 1.0e-23
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: AGAMOUS-like protein 3.474e-21
N-terminus
sp_v3.0_unigene25246 SustainPine v3.0 1608
AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 4.659e-19
C-terminus
sp_v3.0_unigene30227 SustainPine v3.0 1998
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34787 SustainPine v3.0 680
AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: MADS-box protein 3.941e-17
Complete
sp_v3.0_unigene54565 SustainPine v3.0 195
AutoFact: BZip protein AtbZip21 n=3 Tax=Arabidopsis thaliana RepID=Q0WT94_ARATH 4.0e-16
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 9.59e-22
Internal
sp_v3.0_unigene59448 SustainPine v3.0 277
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 3.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 2.254e-12
Internal
sp_v3.0_unigene60048 SustainPine v3.0 385
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 4.0e-29
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene60827 SustainPine v3.0 178
AutoFact: Precursor of carboxylase p-protein 1, glycine decarboxylase complex n=4 Tax=core eudicotyledons RepID=B9HDN2_POPTR 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 1.566e-16
Internal
sp_v3.0_unigene61830 SustainPine v3.0 204
AutoFact: [E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 7.823e-16
Internal
sp_v3.0_unigene62081 SustainPine v3.0 269
AutoFact: Transcription factor HBP-1b(C1), putative n=1 Tax=Ricinus communis RepID=B9T2C4_RICCO 2.0e-22
FL-Next: Isoform 2 of Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 0.0
Sma3: BZIP transcription factor 9.735e-22
Putative N-terminus
sp_v3.0_unigene63481 SustainPine v3.0 149
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Drosophila RepID=B4MEL9_DROVI 6.0e-17
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain