Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: glycine metabolic process

Term: GO:0006544  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68326 SustainPine v3.0 346
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 2.0e-12
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 3.979e-15
Internal
sp_v3.0_unigene70660 SustainPine v3.0 492
• AutoFact: Serine hydroxymethyltransferase n=9 Tax=Poaceae RepID=Q7Y1F0_ORYSJ 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus
sp_v3.0_unigene74185 SustainPine v3.0 355
• AutoFact: putative glycine dehydrogenase [Arabidopsis thaliana] 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 3.714e-16
C-terminus
sp_v3.0_unigene75213 SustainPine v3.0 372
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 2.0e-38
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Misassembled
sp_v3.0_unigene77335 SustainPine v3.0 281
• AutoFact: Glycine dehydrogenase [decarboxylating], mitochondrial n=1 Tax=Pisum sativum RepID=GCSP_PEA 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 6.428e-16
Internal
sp_v3.0_unigene80173 SustainPine v3.0 237
• AutoFact: putative glycine dehydrogenase [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 4.649e-16
C-terminus
sp_v3.0_unigene93866 SustainPine v3.0 779
• AutoFact: MADS-box transcription factor GbMADS5 n=1 Tax=Ginkgo biloba RepID=Q58A78_GINBI 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS-box protein 1.881e-11
N-terminus
sp_v3.0_unigene102017 SustainPine v3.0 509
• AutoFact: Adenine nucleotide alpha hydrolase domain-containing protein kinase n=3 Tax=Arabidopsis RepID=Q1PF03_ARATH 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 1.003e-15
N-terminus
sp_v3.0_unigene119714 SustainPine v3.0 491
• AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 2.0e-25
• FL-Next: tr=MADS3 protein; Thujopsis dolabrata (Hiba arborvitae) (Platycladus dolabrata). 0.0
• Sma3: MADS box transcription factor 7.062e-19
N-terminus
sp_v3.0_unigene120208 SustainPine v3.0 125
• AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 4.0e-12
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 1.102e-06
Internal
sp_v3.0_unigene127856 SustainPine v3.0 1763
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene128058 SustainPine v3.0 415
• AutoFact: [E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 4.119e-16
Internal
sp_v3.0_unigene128326 SustainPine v3.0 568
• AutoFact: glycine decarboxylase P subunit [x Tritordeum sp.] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 8.674e-16
C-terminus
sp_v3.0_unigene129374 SustainPine v3.0 434
• AutoFact: BZIP domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIQ7_MALDO 9.0e-19
• FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
• Sma3: BZIP transcription factor 3.163e-19
Putative N-terminus
sp_v3.0_unigene129557 SustainPine v3.0 976
• AutoFact: Putative MADS box transcription factor PrMADS6 n=2 Tax=Pinus radiata RepID=O24490_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS6; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: MADS-box transcription factor 2.167e-20
Complete
sp_v3.0_unigene137158 SustainPine v3.0 248
• AutoFact: Glycine dehydrogenase [decarboxylating] A, mitochondrial n=4 Tax=Flaveria RepID=GCSPA_FLAPR 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 8.674e-16
Internal
sp_v3.0_unigene140616 SustainPine v3.0 731
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
Internal
sp_v3.0_unigene142925 SustainPine v3.0 454
• AutoFact: Os06g0611900 protein n=2 Tax=Oryza sativa RepID=Q0DAZ7_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 7.823e-16
Internal
sp_v3.0_unigene143003 SustainPine v3.0 289
• AutoFact: Glycine dehydrogenase [decarboxylating] 1, mitochondrial n=8 Tax=Brassicaceae RepID=GCSP1_ARATH 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine dehydrogenase [decarboxylating], mitochondrial 7.163e-16
Putative N-terminus
sp_v3.0_unigene150830 SustainPine v3.0 527
• AutoFact: Serine hydroxymethyltransferase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RQ31_PHYPA 1.99993e-41
• FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine hydroxymethyltransferase 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain