Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, GATA-type

Term: IPR000679  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene75803 SustainPine v3.0 470
AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SDN5_RICCO 0.0
FL-Next: sp=F-box protein At5g06550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76562 SustainPine v3.0 315
AutoFact: [K] COG5641 GATA Zn-finger-containing transcription factor 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor, putative 1.072e-17
N-terminus
sp_v3.0_unigene81413 SustainPine v3.0 125
AutoFact: Amine oxidase, putative n=1 Tax=Ricinus communis RepID=B9SUC7_RICCO 2.0e-09
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene93905 SustainPine v3.0 621
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.00264e-43
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 3.922e-09
Putative C-terminus
sp_v3.0_unigene94910 SustainPine v3.0 886
AutoFact: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SDN5_RICCO 0.0
FL-Next: sp=F-box protein At5g06550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcription factor jumonji, putative, expressed 1.0e-08
C-terminus
sp_v3.0_unigene95618 SustainPine v3.0 315
AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 1.0e-08
FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102221 SustainPine v3.0 867
AutoFact: GATA transcription factor 12 n=2 Tax=Arabidopsis thaliana RepID=GAT12_ARATH 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 2.512e-16
Putative Complete
sp_v3.0_unigene102990 SustainPine v3.0 725
AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 6.99949e-42
FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: GATA zinc finger containing protein 1.54e-13
N-terminus
sp_v3.0_unigene103859 SustainPine v3.0 427
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 0.0
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Protein LSD1-LIKE 2 1.869e-08
Internal
sp_v3.0_unigene104413 SustainPine v3.0 667
AutoFact: Ubiquitin specific protease 12 n=1 Tax=Nicotiana tabacum RepID=B6V765_TOBAC 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 9.986e-07
Internal
sp_v3.0_unigene105495 SustainPine v3.0 207
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 9.0e-15
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.514e-08
Internal
sp_v3.0_unigene108389 SustainPine v3.0 556
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 1.022e-06
Putative Complete
sp_v3.0_unigene108415 SustainPine v3.0 523
AutoFact: GATA transcription factor 26 [Arabidopsis thaliana] sp|Q8W4H1.1|GAT26_ARATH RecName: Full=GATA transcription factor 26 gb|AAL32640.1| Unknown protein [Arabidopsis thaliana] gb|AAV85711.1| At4g17570 [Arabidopsis thaliana] gb|AEE83912.1| GATA transcription 1.0e-09
FL-Next: sp=GATA transcription factor 26; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene118092 SustainPine v3.0 171
AutoFact: pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase 3.0e-11
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein LSD1-LIKE 2 1.273e-08
Internal
sp_v3.0_unigene128050 SustainPine v3.0 719
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.848e-07
Internal
sp_v3.0_unigene154453 SustainPine v3.0 307
AutoFact: Unassigned protein
FL-Next: Isoform 2 of F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 0.0
Internal
sp_v3.0_unigene160065 SustainPine v3.0 478
AutoFact: JmjC domain containing protein 5.0e-12
FL-Next: sp=F-box protein At5g06550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160899 SustainPine v3.0 373
AutoFact: Ubiquitin carboxyl-terminal hydrolase 12 n=8 Tax=Brassicaceae RepID=UBP12_ARATH 5.0e-37
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162648 SustainPine v3.0 177
AutoFact: RecName: Full=Lysine-specific histone demethylase 1 homolog 3; AltName: Full=Flavin-containing amine oxidase domain-containing protein 3; AltName: Full=Protein FLOWERING LOCUS D-LIKE; AltName: Full=Protein LSD1-LIKE 3 emb|CAH68056.1| B0103C08-B0602B01.13 3.0e-12
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Flavin-containing amine oxidase domain-containing protein, putative 5.237e-09
Internal
sp_v3.0_unigene168310 SustainPine v3.0 229
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 5.0e-29
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWIRM domain protein 2.407e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain