Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: innate immune response

Term: GO:0045087  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20081 SustainPine v3.0 641
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran GTPase binding protein, putative 6.232e-22
Internal
sp_v3.0_unigene20482 SustainPine v3.0 620
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative TIR/NBS/LRR disease resistance protein 1.817e-09
N-terminus
sp_v3.0_unigene20639 SustainPine v3.0 1294
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene20752 SustainPine v3.0 975
AutoFact: Calcineurin B-like protein 01 n=1 Tax=Selaginella moellendorffii RepID=C4P7X6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcineurin B, putative 1.419e-26
Complete
sp_v3.0_unigene21141 SustainPine v3.0 1075
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 2.0e-22
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene21252 SustainPine v3.0 909
AutoFact: TT_ORF1 multi-domain protein 3.0e-14
Sma3: Nucleolar GTPase/ATPase p130 (ISS) 8.772e-06
coding
sp_v3.0_unigene21367 SustainPine v3.0 827
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 0.0
FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Sma3: TIR/P-loop/LRR 7.31e-06
C-terminus
sp_v3.0_unigene21429 SustainPine v3.0 583
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21526 SustainPine v3.0 1108
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NBS/LRR 1.934e-08
N-terminus
sp_v3.0_unigene21553 SustainPine v3.0 470
AutoFact: putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene21601 SustainPine v3.0 693
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 4.0e-36
FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene21606 SustainPine v3.0 533
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 9.0e-29
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene21770 SustainPine v3.0 566
AutoFact: Resistance gene homolog, . (Fragment) n=1 Tax=Pinus radiata RepID=O49121_PINRA 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene21882 SustainPine v3.0 536
AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.704e-32
Internal
sp_v3.0_unigene21978 SustainPine v3.0 409
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J7_PINTA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TIR/P-loop/LRR 5.848e-06
N-terminus
sp_v3.0_unigene22021 SustainPine v3.0 335
AutoFact: mannose-binding lectin-like protein [Arabidopsis thaliana] gb|AAL32575.1| Unknown protein [Arabidopsis thaliana] gb|AAL91614.1| At1g19720/F14P1_33 [Arabidopsis thaliana] gb|AAN15429.1| Unknown protein [Arabidopsis thaliana] gb|AEE29888.1| mannose-binding 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22146 SustainPine v3.0 670
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.064e-38
Internal
sp_v3.0_unigene22162 SustainPine v3.0 246
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 3.0e-28
FL-Next: tr=Putative TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Internal
sp_v3.0_unigene22173 SustainPine v3.0 801
AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9MZW4_POPTR 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22190 SustainPine v3.0 1372
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
FL-Next: tr=Putative truncated TIR-NBS-LRR protein; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Sma3: Putative TIR/NBS/LRR disease resistance protein 5.208e-09
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain