Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LisH dimerisation motif, subgroup

Term: IPR013720  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene141179 SustainPine v3.0 308
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 1.045e-09
Internal
sp_v3.0_unigene142251 SustainPine v3.0 1294
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 1.23174e-42
N-terminus
sp_v3.0_unigene142413 SustainPine v3.0 442
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 6.126e-10
Internal
sp_v3.0_unigene143314 SustainPine v3.0 531
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 5.954e-12
Internal
sp_v3.0_unigene143981 SustainPine v3.0 410
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Sma3: WD-repeat protein, putative 1.253e-07
Internal
sp_v3.0_unigene143991 SustainPine v3.0 394
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 6.78e-12
Internal
sp_v3.0_unigene144757 SustainPine v3.0 1321
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 3.092e-12
Internal
sp_v3.0_unigene145329 SustainPine v3.0 868
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene146089 SustainPine v3.0 854
AutoFact: WD-repeat protein, putative 3.0e-35
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.703e-09
Internal
sp_v3.0_unigene146152 SustainPine v3.0 477
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 9.99967e-42
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.703e-09
Internal
sp_v3.0_unigene146206 SustainPine v3.0 582
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene146794 SustainPine v3.0 814
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 4.597e-12
Internal
sp_v3.0_unigene146795 SustainPine v3.0 1039
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 1.181e-09
Putative C-terminus
sp_v3.0_unigene146831 SustainPine v3.0 513
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-16
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene146843 SustainPine v3.0 431
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 5.211e-12
Internal
sp_v3.0_unigene146844 SustainPine v3.0 482
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene146860 SustainPine v3.0 885
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.093e-09
Internal
sp_v3.0_unigene146865 SustainPine v3.0 673
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.361e-09
Internal
sp_v3.0_unigene146880 SustainPine v3.0 744
AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 5.0e-40
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.297e-07
Internal
sp_v3.0_unigene146902 SustainPine v3.0 502
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 6.02e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain