Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LisH dimerisation motif, subgroup

Term: IPR013720  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene40431 SustainPine v3.0 1293
• AutoFact: WD-repeat protein, putative 0.0
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 6.153e-12
Internal
sp_v3.0_unigene40437 SustainPine v3.0 455
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 1.0e-23
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 1.688e-09
Internal
sp_v3.0_unigene40441 SustainPine v3.0 3245
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 2.168e-09
Putative Complete
sp_v3.0_unigene40442 SustainPine v3.0 1686
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.282e-07
Putative C-terminus
sp_v3.0_unigene40660 SustainPine v3.0 1121
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 7.615e-12
Putative C-terminus
sp_v3.0_unigene41314 SustainPine v3.0 840
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.357e-12
Internal
sp_v3.0_unigene41673 SustainPine v3.0 270
• AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 5.0e-24
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene42323 SustainPine v3.0 1581
• AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-06
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.13e-09
C-terminus
sp_v3.0_unigene42569 SustainPine v3.0 436
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 5.60519e-45
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 2.282e-09
Internal
sp_v3.0_unigene42650 SustainPine v3.0 468
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.384e-09
Internal
sp_v3.0_unigene43135 SustainPine v3.0 243
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-18
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.688e-09
Internal
sp_v3.0_unigene45135 SustainPine v3.0 138
• AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 1.0e-14
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.322e-07
Internal
sp_v3.0_unigene45577 SustainPine v3.0 346
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene46306 SustainPine v3.0 319
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 9.401e-10
Internal
sp_v3.0_unigene47914 SustainPine v3.0 417
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 7.302e-12
Internal
sp_v3.0_unigene50178 SustainPine v3.0 206
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53119 SustainPine v3.0 135
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 2.0e-11
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Transcriptional corepressor LEUNIG 7.227e-08
Internal
sp_v3.0_unigene53270 SustainPine v3.0 258
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 7.302e-12
Putative N-terminus
sp_v3.0_unigene53360 SustainPine v3.0 376
• AutoFact: Topless-related 2 protein [Arabidopsis thaliana] sp|Q9LRZ0.2|TPR2_ARATH RecName: Full=Topless-related protein 2 gb|AEE75871.1| Topless-related 2 protein [Arabidopsis thaliana] 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.357e-09
N-terminus
sp_v3.0_unigene54263 SustainPine v3.0 262
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 8.0e-17
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.703e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain