Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77 SustainPine v3.0 1222
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative Complete
sp_v3.0_unigene3015 SustainPine v3.0 1411
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.79e-08
Complete
sp_v3.0_unigene3637 SustainPine v3.0 999
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene4332 SustainPine v3.0 774
AutoFact: polyubiquitin [Triticum aestivum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.842e-08
Putative Complete
sp_v3.0_unigene4380 SustainPine v3.0 447
AutoFact: Polyubiquitin 12 n=5 Tax=Eukaryota RepID=UBQ12_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.204e-07
Putative Complete
sp_v3.0_unigene4417 SustainPine v3.0 830
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative Complete
sp_v3.0_unigene4498 SustainPine v3.0 368
AutoFact: [O] COG5272 Ubiquitin 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin, putative 4.685e-07
Putative Complete
sp_v3.0_unigene4569 SustainPine v3.0 477
AutoFact: [O] COG5272 Ubiquitin 6.0e-36
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene4700 SustainPine v3.0 344
AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene4916 SustainPine v3.0 841
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.649e-08
Putative Complete
sp_v3.0_unigene5003 SustainPine v3.0 225
AutoFact: Ubiquitin [Medicago truncatula] 2.0e-26
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 1.139e-10
Putative Complete
sp_v3.0_unigene11397 SustainPine v3.0 929
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene17095 SustainPine v3.0 2067
AutoFact: ubiquitin [Solanum lycopersicum] 0.0
FL-Next: sp=Polyubiquitin; Aglaothamnion neglectum (Red alga). 0.0
Sma3: Bi-ubiquitin 1.712e-08
Complete
sp_v3.0_unigene17293 SustainPine v3.0 1607
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.674e-08
Complete
sp_v3.0_unigene17377 SustainPine v3.0 1313
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.816e-08
Complete
sp_v3.0_unigene17537 SustainPine v3.0 1805
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Misassembled
sp_v3.0_unigene17641 SustainPine v3.0 1059
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.803e-08
Complete
sp_v3.0_unigene17720 SustainPine v3.0 1201
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.79e-08
Putative Complete
sp_v3.0_unigene17858 SustainPine v3.0 681
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.764e-08
Putative Complete
sp_v3.0_unigene18398 SustainPine v3.0 663
AutoFact: Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.777e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain