Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene29895 SustainPine v3.0 536
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 3.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene30834 SustainPine v3.0 577
AutoFact: Ubiquitin-40S ribosomal protein S27a n=60 Tax=Eumetazoa RepID=RS27A_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.021e-06
Complete
sp_v3.0_unigene31303 SustainPine v3.0 456
AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SFI2_PARBP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin extension protein 1/2 0.0
Complete
sp_v3.0_unigene31515 SustainPine v3.0 253
AutoFact: Chain A, Structure Of Ubiquitin Solved By Sad Using The Lanthanide- Binding Tag 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31533 SustainPine v3.0 449
AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GNZ3_PARBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 5.744e-07
Putative Complete
sp_v3.0_unigene31581 SustainPine v3.0 127
AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-08
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene31614 SustainPine v3.0 662
AutoFact: [O] COG5272 Ubiquitin 7.0e-25
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene31774 SustainPine v3.0 398
AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Putative Complete
sp_v3.0_unigene31998 SustainPine v3.0 245
AutoFact: UBiQuitin family member isoform 1 n=1 Tax=Polysphondylium pallidum RepID=D3B469_POLPA 3.0e-21
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Sma3: Ubiquitin 5.094e-07
Complete
sp_v3.0_unigene32131 SustainPine v3.0 596
AutoFact: PREDICTED: similar to ubiquitin B precursor isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0BED 4.0e-38
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene32366 SustainPine v3.0 859
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene32565 SustainPine v3.0 788
AutoFact: ubiquitin [Solanum lycopersicum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin 3.564e-07
Putative Complete
sp_v3.0_unigene32591 SustainPine v3.0 489
AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Complete
sp_v3.0_unigene32678 SustainPine v3.0 522
AutoFact: polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene32746 SustainPine v3.0 450
AutoFact: Ubiquitin n=2 Tax=Suberites domuncula RepID=O96951_SUBDO 5.99756e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.678e-06
C-terminus
sp_v3.0_unigene32918 SustainPine v3.0 951
AutoFact: Ubiquitin n=1 Tax=Aureococcus anophagefferens RepID=F0XWQ8_9STRA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene33028 SustainPine v3.0 491
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Complete
sp_v3.0_unigene33042 SustainPine v3.0 1097
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Complete
sp_v3.0_unigene33074 SustainPine v3.0 491
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 3.0e-36
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene34399 SustainPine v3.0 539
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.102e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain