Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene155345 SustainPine v3.0 463
AutoFact: Ubiquitin/ribosomal fusion protein n=1 Tax=Loa loa RepID=E1FY98_LOALO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 6.088e-07
C-terminus
sp_v3.0_unigene155514 SustainPine v3.0 260
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 1.0e-39
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene155742 SustainPine v3.0 140
AutoFact: Ubiquitin extension protein n=2 Tax=Heterodera schachtii RepID=Q86DU4_HETSC 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155938 SustainPine v3.0 442
AutoFact: Ubiquitin/40S ribosomal protein S27a fusion protein n=1 Tax=Argas monolakensis RepID=Q09JW5_ARGMO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155978 SustainPine v3.0 191
AutoFact: Ubiquitin-40S ribosomal protein S27a n=53 Tax=Eukaryota RepID=RS27A_NEUCR 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene156057 SustainPine v3.0 192
AutoFact: Ubiquitin, putative n=2 Tax=Eukaryota RepID=D0NEJ7_PHYIT 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene156275 SustainPine v3.0 372
AutoFact: Chain A, Structure Of Ubiquitin-Like Protein, Rub1 1.0e-24
FL-Next: tr=Ubiquitin; Coccomyxa subellipsoidea C-169. 0.0
Sma3: Ubiquitin-related protein 3 2.689e-08
Complete
sp_v3.0_unigene157832 SustainPine v3.0 211
AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 2.147e-09
Internal
sp_v3.0_unigene158220 SustainPine v3.0 246
AutoFact: 40S ribosomal protein S27A, putative n=1 Tax=Ixodes scapularis RepID=B7P0U0_IXOSC 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159412 SustainPine v3.0 248
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 4.485e-09
Putative C-terminus
sp_v3.0_unigene160210 SustainPine v3.0 430
AutoFact: Ubiquitin n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9DYE5_METAQ 4.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene161457 SustainPine v3.0 117
AutoFact: [O] COG5272 Ubiquitin 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene164113 SustainPine v3.0 295
AutoFact: ubiquitin extension protein [Capsicum annuum] 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene165655 SustainPine v3.0 369
AutoFact: 60S ribosomal protein L40 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9S759_VERA1 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CEP52 3.796e-07
C-terminus
sp_v3.0_unigene165854 SustainPine v3.0 431
AutoFact: Polyubiquitin 2 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00UH7_OSTTA 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 1.381e-09
Complete
sp_v3.0_unigene165955 SustainPine v3.0 117
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYR3_TRISP 1.0e-11
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene166765 SustainPine v3.0 265
AutoFact: Probable ubiquitin/ribosomal protein S27a fusion protein n=2 Tax=Ustilaginaceae RepID=E6ZP53_9BASI 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S27a 2.046e-06
Internal
sp_v3.0_unigene167184 SustainPine v3.0 359
AutoFact: Putative ubiquitin extension protein (Fragment) n=1 Tax=Brassica rapa RepID=Q39408_BRACM 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 3.92e-10
Putative C-terminus
sp_v3.0_unigene167332 SustainPine v3.0 263
AutoFact: ubiquitin [Musa acuminata AAA Group] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene167680 SustainPine v3.0 198
AutoFact: Ubiquitin, putative n=5 Tax=Chromadorea RepID=A8NSV0_BRUMA 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain