Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77118 SustainPine v3.0 118
AutoFact: [O] COG5272 Ubiquitin 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene77123 SustainPine v3.0 186
AutoFact: [O] COG5272 Ubiquitin 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene77228 SustainPine v3.0 195
AutoFact: Polyubiquitin 12 n=5 Tax=Eukaryota RepID=UBQ12_ARATH 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 8.613e-08
Putative N-terminus
sp_v3.0_unigene77275 SustainPine v3.0 181
AutoFact: Ubiquitin (Fragment) n=1 Tax=Artemisia annua RepID=A9LSF0_ARTAN 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77457 SustainPine v3.0 292
AutoFact: [O] COG5272 Ubiquitin 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78068 SustainPine v3.0 259
AutoFact: Ubiquitin [Medicago truncatula] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78070 SustainPine v3.0 320
AutoFact: Ubiquitin [Medicago truncatula] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78073 SustainPine v3.0 172
AutoFact: Ribosomal L40e family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CCCB2 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78084 SustainPine v3.0 188
AutoFact: [O] COG5272 Ubiquitin 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78130 SustainPine v3.0 293
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78964 SustainPine v3.0 242
AutoFact: Ubiquitin 1 n=1 Tax=Physarum polycephalum RepID=Q966Q8_PHYPO 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78973 SustainPine v3.0 344
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 1.86e-10
Internal
sp_v3.0_unigene79227 SustainPine v3.0 256
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene79333 SustainPine v3.0 360
AutoFact: Ubiquitin [Medicago truncatula] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene79640 SustainPine v3.0 162
AutoFact: [O] COG5272 Ubiquitin 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene79694 SustainPine v3.0 229
AutoFact: ubiquitin [Solanum lycopersicum] 4.0e-29
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.073e-07
Putative Complete
sp_v3.0_unigene80048 SustainPine v3.0 149
AutoFact: polyubiquitin [Triticum aestivum] 3.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.105e-07
Putative N-terminus
sp_v3.0_unigene80179 SustainPine v3.0 174
AutoFact: [O] COG5272 Ubiquitin 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80721 SustainPine v3.0 234
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYQ3_TRISP 8.0e-35
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene81538 SustainPine v3.0 144
AutoFact: Polyubiquitin n=1 Tax=Lilium longiflorum RepID=Q9SEK7_LILLO 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain