Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: LisH dimerisation motif

Term: IPR006594  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40445 SustainPine v3.0 622
AutoFact: Topless-related protein 4 n=4 Tax=Arabidopsis RepID=TPR4_ARATH 2.0e-32
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Internal
sp_v3.0_unigene40447 SustainPine v3.0 1210
AutoFact: Topless-related protein 3 [Arabidopsis thaliana] sp|Q84JM4.1|TPR3_ARATH RecName: Full=Topless-related protein 3 gb|AAO42071.1| unknown protein [Arabidopsis thaliana] gb|AAO50698.1| unknown protein [Arabidopsis thaliana] gb|AED93642.1| Topless-related prot 1.0e-20
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene40448 SustainPine v3.0 303
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q7XA22_SOLBU 4.0e-19
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene40455 SustainPine v3.0 788
unknown
sp_v3.0_unigene40634 SustainPine v3.0 508
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Internal
sp_v3.0_unigene40660 SustainPine v3.0 1121
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 7.615e-12
Putative C-terminus
sp_v3.0_unigene41314 SustainPine v3.0 840
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.357e-12
Internal
sp_v3.0_unigene41673 SustainPine v3.0 270
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 5.0e-24
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene42323 SustainPine v3.0 1581
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-06
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.13e-09
C-terminus
sp_v3.0_unigene42435 SustainPine v3.0 611
AutoFact: WD-40 repeat protein-like [Populus suaveolens] 3.99931e-42
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.28e-07
Internal
sp_v3.0_unigene42569 SustainPine v3.0 436
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 5.60519e-45
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 2.282e-09
Internal
sp_v3.0_unigene42650 SustainPine v3.0 468
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.384e-09
Internal
sp_v3.0_unigene42882 SustainPine v3.0 145
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 0.0
Internal
sp_v3.0_unigene43135 SustainPine v3.0 243
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-18
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.688e-09
Internal
sp_v3.0_unigene43413 SustainPine v3.0 213
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-14
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-40 repeat protein-like 8.19e-08
Internal
sp_v3.0_unigene44137 SustainPine v3.0 734
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 8.0e-19
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene45135 SustainPine v3.0 138
AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 1.0e-14
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.322e-07
Internal
sp_v3.0_unigene45577 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene46306 SustainPine v3.0 319
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 9.401e-10
Internal
sp_v3.0_unigene47498 SustainPine v3.0 585
AutoFact: putative polyamine oxidase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain