Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene62111 SustainPine v3.0 281
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 4.0e-23
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified, expressed 1.02e-06
N-terminus
sp_v3.0_unigene62207 SustainPine v3.0 215
• AutoFact: Phytochrome A-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0Z8K8_PICSI 2.0e-18
• FL-Next: tr=SCARECROW-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: GRAS family transcription factor 1.857e-15
Internal
sp_v3.0_unigene62243 SustainPine v3.0 379
• AutoFact: RVT_1 domain containing protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.094e-39
Putative Complete
sp_v3.0_unigene62520 SustainPine v3.0 305
• AutoFact: receptor protein kinase [Pinus sylvestris] 3.0e-26
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor protein kinase EXS, putative 1.532e-08
Internal
sp_v3.0_unigene62674 SustainPine v3.0 228
• AutoFact: Leucine-rich repeat receptor protein kinase EXS, putative n=1 Tax=Ricinus communis RepID=B9RWM9_RICCO 2.0e-14
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.883e-08
Internal
sp_v3.0_unigene62940 SustainPine v3.0 177
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 8.0e-19
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene62941 SustainPine v3.0 213
• AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 2.0e-22
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.305e-21
Internal
sp_v3.0_unigene63026 SustainPine v3.0 273
• AutoFact: polyprotein [Glycine max] 3.0e-20
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.419e-17
Internal
sp_v3.0_unigene64091 SustainPine v3.0 328
• AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 3.0e-28
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.201e-22
Internal
sp_v3.0_unigene64614 SustainPine v3.0 200
• AutoFact: Elongation factor 1-alpha n=1 Tax=Loa loa RepID=E1FZJ2_LOALO 1.0e-20
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.282e-36
Internal
sp_v3.0_unigene64827 SustainPine v3.0 156
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q2TUP3_9CONI 6.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 2.799e-28
Internal
sp_v3.0_unigene65525 SustainPine v3.0 368
• AutoFact: Expansin 2 n=1 Tax=Cunninghamia lanceolata RepID=A1Z1N8_CUNLA 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene65678 SustainPine v3.0 423
• AutoFact: Expansin-A2 n=3 Tax=Arabidopsis RepID=EXPA2_ARATH 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene65756 SustainPine v3.0 114
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.705e-26
Internal
sp_v3.0_unigene65837 SustainPine v3.0 188
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.0e-25
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.65501e-41
Internal
sp_v3.0_unigene65901 SustainPine v3.0 143
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.55e-33
Internal
sp_v3.0_unigene66117 SustainPine v3.0 394
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 2.94273e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene66214 SustainPine v3.0 372
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.091e-32
Putative C-terminus
sp_v3.0_unigene66611 SustainPine v3.0 402
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 9.0e-39
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.134e-21
Putative C-terminus
sp_v3.0_unigene66939 SustainPine v3.0 151
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain