Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53313 SustainPine v3.0 488
• AutoFact: OSJNBa0032F06.19 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XPW2_ORYSJ 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.941e-32
Putative Complete
sp_v3.0_unigene53571 SustainPine v3.0 473
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.386e-22
N-terminus
sp_v3.0_unigene53805 SustainPine v3.0 359
• AutoFact: UPF0066 domain containing protein 5.0e-10
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene54049 SustainPine v3.0 414
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 1.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.233e-15
Putative N-terminus
sp_v3.0_unigene54127 SustainPine v3.0 405
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.076e-18
C-terminus
sp_v3.0_unigene54326 SustainPine v3.0 495
• AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54371 SustainPine v3.0 432
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa RepID=Q8S7F8_ORYSA 9.0e-31
• FL-Next: tr=Os03g0377400 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, unclassified, expressed 4.11e-12
Internal
sp_v3.0_unigene54702 SustainPine v3.0 355
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.278e-21
Putative Complete
sp_v3.0_unigene54772 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.626e-21
C-terminus
sp_v3.0_unigene54806 SustainPine v3.0 460
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.966e-26
Putative Complete
sp_v3.0_unigene54835 SustainPine v3.0 452
• AutoFact: heat shock protein-like protein [Arabidopsis thaliana] dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis thaliana] gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Heat shock protein-related-like 3.951e-08
Internal
sp_v3.0_unigene54980 SustainPine v3.0 488
• AutoFact: Plastid-dividing ring protein n=4 Tax=Solanaceae RepID=D3J5I7_SOLLC 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plastid division protein FtsZ 1.247e-27
Putative N-terminus
sp_v3.0_unigene55029 SustainPine v3.0 427
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 9.827e-20
Putative Complete
sp_v3.0_unigene55320 SustainPine v3.0 210
• AutoFact: biotin carboxylase [Stappia aggregata IAM 12614] gb|EAV41935.1| biotin carboxylase [Stappia aggregata IAM 12614] 3.0e-12
• FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 4.065e-13
Internal
sp_v3.0_unigene55837 SustainPine v3.0 214
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 1.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene55878 SustainPine v3.0 287
• AutoFact: Os08g0164800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7S9_ORYSJ 3.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 8.213e-10
Putative C-terminus
sp_v3.0_unigene55939 SustainPine v3.0 186
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 6.0e-22
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene56411 SustainPine v3.0 263
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-20
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.223e-23
Internal
sp_v3.0_unigene56506 SustainPine v3.0 516
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.365e-29
Putative Complete
sp_v3.0_unigene56571 SustainPine v3.0 397
• AutoFact: Putative retroelement integrase n=1 Tax=Arabidopsis thaliana RepID=Q8S8M1_ARATH 5.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.436e-26
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain