Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142365 SustainPine v3.0 469
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene143392 SustainPine v3.0 349
• AutoFact: Expansin 2 n=1 Tax=Zinnia violacea RepID=Q9LLB2_ZINEL 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene143493 SustainPine v3.0 386
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene143502 SustainPine v3.0 522
• AutoFact: RVT_1 domain containing protein 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.706e-21
Putative Complete
sp_v3.0_unigene143696 SustainPine v3.0 384
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.00001e-40
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative polyprotein 1.864e-22
Putative C-terminus
sp_v3.0_unigene143893 SustainPine v3.0 760
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene144182 SustainPine v3.0 360
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 8.0e-33
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.747e-36
Putative N-terminus
sp_v3.0_unigene144517 SustainPine v3.0 702
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative retroelement 6.164e-17
Putative Complete
sp_v3.0_unigene144834 SustainPine v3.0 559
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.99e-38
Putative Complete
sp_v3.0_unigene145028 SustainPine v3.0 305
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 6.0e-25
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.021e-15
Internal
sp_v3.0_unigene145118 SustainPine v3.0 434
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 5.99994e-41
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.921e-20
Putative N-terminus
sp_v3.0_unigene146085 SustainPine v3.0 321
• AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene146160 SustainPine v3.0 563
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.441e-37
N-terminus
sp_v3.0_unigene147960 SustainPine v3.0 455
• AutoFact: polyprotein [Primula vulgaris] 2.0e-35
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.852e-17
C-terminus
sp_v3.0_unigene148152 SustainPine v3.0 275
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.602e-19
Internal
sp_v3.0_unigene148527 SustainPine v3.0 250
• AutoFact: RecName: Full=50S ribosomal protein L24, chloroplastic; AltName: Full=CL24; Flags: Precursor gb|AAA34086.1| ribosomal protein L24 [Nicotiana tabacum] gb|AAA34114.1| ribosomal protein L24 [Nicotiana tabacum] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CL24 2.528e-17
Internal
sp_v3.0_unigene148910 SustainPine v3.0 413
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Uncharacterized protein At2g02148 9.26e-06
Internal
sp_v3.0_unigene149103 SustainPine v3.0 346
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.22e-36
Putative Complete
sp_v3.0_unigene149166 SustainPine v3.0 242
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2N6_ORYSJ 3.0e-15
• FL-Next: tr=Putative uncharacterized protein P0001A07.10; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149319 SustainPine v3.0 331
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7X6_ORYSJ 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.2039e-45
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain